Strain | Pseudomonas aeruginosa strain AZPAE14879 AZPAE14879_contig_24, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGGCACCCGCAGCGCGGTGGCCGGCTCGCTGCTGGCGGCGATGAACACCGCCTCGGAATACGGCTTCGGTGCGGTGATCGCCTCGCTGCCGGGCTTCCTG GTGCTGGCCGACGCGCTCAAGAGCATTCCCAATCCGCTGGTCAACGAAGCGATCACCGTCACCCTGCTGGCCGGCATCACCGGTTCCGCGTCGGGCGGCA TGAGCATCGCCCTGGCGGCGATGTCCGATACCTTCATCGCCGCCGCCAACGCCGCGCAGATCCCCCTGGAAGTCCTCCACCGGGTCGCCGCCATGGCCAG CGGCGGGATGGATACCCTGCCGCACAACGGCGCGGTGATCACCCTCCTGGCGGTCACCGGCCTGACCCATCGGGAGGCGTACAAGGACATTTTCGGTATT ACCCTGATCAAGACCCTGGCGGTGTTCTTCGTCATCGGGCTGTTCTACGCCACCGGCCTGGTCTGATCCGCCCTTTTTTTCATCCAGCGGGAGAAACAGC
|
|
DNA Sequence for Gene |
>NR95_RS24625
ATGACCCTGAAAGGCAAGACCGCCCTGGTCACCGGTTCCACCAGCGGCATCGGCCTGGGCATCGCCCTGAGCCTGGCCGAGGCCGGCGCCGACCTGCTCC TCAACGGCTTCGGCGAGGTCGACGCGGCACTGGCGCAGGTCCGCGCCCGCGGCGTGCGCGCAGAGCACCACCCGGCCGACCTCTCCAGCCCGGAGCAGAT CGGCGAACTGATGGCCTTCGCCGAGCGGACCTTCGGCGGCGTCGACATCCTCGTCAACAACGCCGGCATCCAGTACGTGGCGCCGGTGCAGGAATTCCCC ACGGAACGCTGGGACGCGATCATCGCGATCAACCTGTCCTCAGTGTTCCATACCACCCGCCTGGCCCTGCCGGGCATGCTCGCGCGCGGCTGGGGGCGGA TCGTCAACATCGCCTCGACCCACGGCCTGGTCGCCTCGGCCGGGAAGAGCGCCTACGTCGCCGCCAAGCATGGCGTGCTCGGCCTGACCAAGAGTGTGGC GCTGGAAACGGCGCGCACGCCGGTGACCTGCAACGCCATCTGCCCCGGCTGGGTGCTGACCCCGCTGGTGCAGAAGCAGATCGACGCGCGCACCGCCGAG GGCGTCTCGCCCGAACAGGCGGAACATGACCTGCTGGCGGAAAAGCAACCCTCGCTGGCCTTCGTCACCCCCGAGCAACTCGGCGGACTGACGCTGTTCC TTTGCAGCGAAGCCGCCGACCAGGTGCGCGGCGCGGCCTGGAACATGGATGGCGGCTGGGTGGCGCAGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CCGGGGCGGCCAGCCTCTCCCCAGACCCTCTCCCTGAAGGGAGAGGGAACCATCCGGAGTTCGCCCGCCCCATTGCGTAGGGCGGATAACGCCATAGGCG TTATCCGCCGATACCTCGTTTCCCGGCGCGGCTGCCCTCTCCCCAACCTTCTCCCTTCAGGGAGAGGAAGTTATCGGGGCCAGGTCGGTCCGCCGATGCG CTACGGCATCACCGGTGGGATGTACGCCAGGGTACTGCCCAGGGCCCAGAGCAGCACCAGCACCAGCGGGATGTGCACCAGCAACTGGACGAACGAGAAG CCGATCAGGTCGCGCGCCTTCAGCCCCAGCACGCCGAGCAACGGCAGCATGTAGAACGGGTTGATCAGGTTCGGCAGCGCCTCGGCGGCGTTGTAGATCT GCACCGCCCAGCCGAGGTGGTATTGCAGCTCGTTGGCCACCTGCATCACGTACGGCGCCTCGATGATCCACTTGCCGCCGCCGGAGGGAATGAAGAAGCC
|
|
Amino Acid Sequence |
>3-hydroxybutyrate dehydrogenase
MTLKGKTALVTGSTSGIGLGIALSLAEAGADLLLNGFGEVDAALAQVRARGVRAEHHPADLSSPEQIGELMAFAERTFGGVDILVNNAGIQYVAPVQEFP TERWDAIIAINLSSVFHTTRLALPGMLARGWGRIVNIASTHGLVASAGKSAYVAAKHGVLGLTKSVALETARTPVTCNAICPGWVLTPLVQKQIDARTAE GVSPEQAEHDLLAEKQPSLAFVTPEQLGGLTLFLCSEAADQVRGAAWNMDGGWVAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|