Pseudomonas aeruginosa AZPAE14879, NR95_RS23860
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14879 AZPAE14879_contig_22, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTGCGCCGCGAGGAACCCGGCACGCGCCTCACCGTGTTGCAGTCGGCGGTGGCCGCGCGCGCGGAAACGCTCAGCGAAGAGCGTGTGATCAAGGAAGGC CAGCAGGTGCTGATCCTGCCGCAAGGCCTGCAGGCCAGCGAAGCGGCCCCGGCCCTGGCCGGCGCCTGGGAACAAGGCATGCTGGTGGTGGAGAACGCCC GGCTGGCCGACCTGGTGGCGGAACTGGGGCGCTATTCGCCGGCGCTGCTGCGGGTCGACCCGAGCATCGCCGACCTGCGCGTCACCGGCAGTTTCCCGCT GAAGGACACCCGCCTCGCCCTTCAGGCTTTGGAGCCGAGCCTGCCGGTGCGCAGCGTGAGGCACAACGCCTGGTGGTTCGAAGTGGTGCCACGCTGAACC GAACGGGCCGGCGAAAAATTTTTCCCGCCGGCCCTATCACTTTTTCCGACTCGTCCGGCAAGGAGGCATTGAGACTCGTTTCCATCCAGGAGCCCCGCAC
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| DNA Sequence for Gene |
>NR95_RS23860
ATGCCCCGCCCGACGTTCCGTCCCGGCCTGCTCGCCCTAGCCATCGCCCTCGCCGTTCCCGCACCGTTCCTCCACGCCGCCCCGGCCGAACAGGCCAGCG TGCGCGACTACCGCATCGCCGCCGGGCCGCTGGCAGGCACCCTGAACCGCATCGCGGCCCAGGCCGGCCTGGTCCTCACCCTGGACCCGGCGCTCGCCGA AGGACGCAGCGCCCACGCCGTACAAGGTCGCTTCGACGCGCCCGGCGCATTGCGCGAAGCGCTCAAGGGCAGCGGCCTGGAGCTGGTGGAAAATGCCGGC GGCACCTACAGCCTGCGCAAGGTGCCGGAAGACACCCTGTCGTTGCAGGCGATGACGGTCAGCGGCGCCGAGGAAGACCCACTGGGGCCGACCAGCGGCT ACGTGGCCAAGCGCAGCATGACCGGGACCAAGACCGATACGCCGATCCTCGAGACCCCGCGCTCGATCTCGGTGGCGACCCGCCAGCAGATGACCGACCG CGCCGTGCACAACCTCGACGACGCGGTGCGCTACATGCCCGGCGTCGTCGCCAGCAGTTTCGGCAGCGACTCCCGTTCCGACTGGTTGAAGGTGCGCGGC TTCAAGCCGACCCAGTTCCTCGATGGATTGCCGATGGCGACAGGCTCATACAACAACCCGAAGCTGGAGACCTGGAATCTGGAGCGCCTCGCCCTGCTCC GCGGCCCGGCCTCCTCGGTCTACGGCCAGACCCCGCCGGGCGGCATGCTCGACATGGTCAGCCTGCGTCCGCAGAACGTCGCCAGTCACGAGGTGAAGGC CGAGGTCGGCAACTACAACCACAAGCAGGTCAGCTTCGACAGCACCGGCCCGCTCGACGACGAGGGACGCTTTCTCTACCGCGTCTCCGGCGTGGTGCGC GACAGCAACACCCAGGTCGACCATATCGACGACAAGCGCTACAACATCGCCCCGAGCCTGACCTGGAACATCGACGACGATACCCGGCTGACCTTCCTCA GCCAATTCAACCGCGACGATACAGCCGCCACCAGCCAATTCTTGCCGTTACGCGGGACCAAATACGATGCTCCATTCGGAAAGATTTCCCATCACAAAAA CCTCGGCGATCCGGACTGGGACTTCTACGACCGCACCTACTATTGGTTGGGCTACTCCTTCGAACGGCGCATCAACGATGTCTGGCAGTTCCGCCAGAAC CTGCGCTACCTGCGCAACGACCTGTCGTTCCAGACGCTTACGCCAACCAGCAGTATCGATGCGGCCAGCGCCGACGGCACCTTACAGCGCATGACGACCT CGGTGGACGAGGACATCAGTCAGTTCGTGGTAGATAACAATTTCCAGGCTGACTTCGAGACCGGTGCGCTGCGCCATACTCTCCTGCTGGGTATCGATCA CAACCGCACCCGCACCGACTACACCTCGATCTACAACTTCACCGGTGTGCCGCCGACCAACGTCAACAACCCGATCTATGGTCAGCCAATTCCCAAGCCA TCGCGCTCTAGTGCGTTCTATGACTACCGACAGAAGACTTATCAGACCGGGCTCTACGTCCAGGATCAGATCGCCCTCGACAACTGGCGCCTGACCCTCG GCGGCCGCGAGGACTGGGTACATGCCGGCGCCACGTTCTACAATCAGAACGATGCCACCAACACCAGCCGCGACAAGAAATTCAGCGGTAACGCAGCTCT GAGCTACATCTTCGACAACGGCCTGGCGCCCTACCTTTCCTATGCGGAGTCATTCCAGCCAAGCACCGGCGCCGACGATATAGGCTCCAACAAGATGTTC AAACCCACCGAAGGCAAACAATGGGAACTGGGCGTCAAGTATCAACCCGTAGGCTCCGATTCGCTGTTCACCGCAGCCGTCTACGACCTACGCCAGGAGA ACATGAGGGTCACCGACAACGTCAATGGGACACCCACTACCTCGCAGGCTGGCGAGGTTAAGGTCACCGGCTTGGAGCTGGAAGCCACCAGCAACGTCAC AGACAATCTGAAAGTGATCGGCTCCTATAGCTACGCCGACACCGAAGTGAAAAAAGGCCAGTACGCAGGCAACCGCCTGCAACAGGCGCCGCGCAACCAG GCCTCGCTATGGGCCGACTACACCTGGCACGAGGGTACGCTGAACGGTTTCAGCGTGGGTGCCGGCGCCCGCTACGTAGGCTCGACCTACGGCGACCAGG CCAACACCTACGACGGCTACGCCGGCTCGTACACCCTGTACGACGCCGCCGTGCGCTACGACCTGGGCCAATTGAACGGCAGCCTGAAAGGCGTCAGCGT GGCGGTCAATGCCAACAATCTGTTCAACAAGGACTACCTGGCGTCCTGCGACGGCTACTACTGCTACTACGGCGACCAGCGCAGCGTGGTGGGCAGCGTC AGCTACAAGTGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGACGCGTCACAGGTGCGTAACGGCGGATAACCGCTTCGCGGTTATTCGCCCTACCGCAGAACGTACCTTCCGGGCACCGGATGCCCTCCTCCCGCCTG AGGGAGAGGGCCGGGATATCGGCAGCCGGCGCAATGGGGAGGACCTGCATTCCGGGCGCCGGAGATCATCGTTCACCCCGCGATCCGACCCCACAGCGCG CTGGCGTCGTCGTGGATCTTGAAACGCGGGAAAGCCAGGGCCTGGTCGTCGCCCTGTTCGATCTCGCGCAACTCGTCGAGCATGGCGCTCACTCCGACGT CCTCGAGGCGCCGCAGCAACTGTTCGTCGGTATAGCGGCGGAAAGGCTCGACCAGCCGGTCGAAGCCGTCGGTCATCAGCACGAAGGAACGCAACGCGGC GAGCGGCAAGGTCTCGCGCTGCACCTGGCCGACCCAGCGGTCGCTGATGTCCAGCGCCCAGTAGCCCTCGGGCTTGTTCATCAGCAGGCGGTTCTGCCGC
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| Amino Acid Sequence |
>TonB-dependent receptor
MPRPTFRPGLLALAIALAVPAPFLHAAPAEQASVRDYRIAAGPLAGTLNRIAAQAGLVLTLDPALAEGRSAHAVQGRFDAPGALREALKGSGLELVENAG GTYSLRKVPEDTLSLQAMTVSGAEEDPLGPTSGYVAKRSMTGTKTDTPILETPRSISVATRQQMTDRAVHNLDDAVRYMPGVVASSFGSDSRSDWLKVRG FKPTQFLDGLPMATGSYNNPKLETWNLERLALLRGPASSVYGQTPPGGMLDMVSLRPQNVASHEVKAEVGNYNHKQVSFDSTGPLDDEGRFLYRVSGVVR DSNTQVDHIDDKRYNIAPSLTWNIDDDTRLTFLSQFNRDDTAATSQFLPLRGTKYDAPFGKISHHKNLGDPDWDFYDRTYYWLGYSFERRINDVWQFRQN LRYLRNDLSFQTLTPTSSIDAASADGTLQRMTTSVDEDISQFVVDNNFQADFETGALRHTLLLGIDHNRTRTDYTSIYNFTGVPPTNVNNPIYGQPIPKP SRSSAFYDYRQKTYQTGLYVQDQIALDNWRLTLGGREDWVHAGATFYNQNDATNTSRDKKFSGNAALSYIFDNGLAPYLSYAESFQPSTGADDIGSNKMF KPTEGKQWELGVKYQPVGSDSLFTAAVYDLRQENMRVTDNVNGTPTTSQAGEVKVTGLELEATSNVTDNLKVIGSYSYADTEVKKGQYAGNRLQQAPRNQ ASLWADYTWHEGTLNGFSVGAGARYVGSTYGDQANTYDGYAGSYTLYDAAVRYDLGQLNGSLKGVSVAVNANNLFNKDYLASCDGYYCYYGDQRSVVGSV SYKW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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