Strain | Pseudomonas aeruginosa strain AZPAE14879 AZPAE14879_contig_21, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGCGCCGGCAGTTCCCCGACGGGCGGATCAGCGAAGCCTTCCTGCAGGAGTCGGCGGAGCCCGGCAGCTTCGCCGACCTGGCCTGCAACCGTCTGCTGC GCGGCACCGACATGCGCCTGCCGCACGGTGCCACCCTGACCAGCAGCGATGGCTATACGCGCGCCTTCTTCCGCACCAAGTTCTGGGTCGAGGACGAGGC GCCGCGCACCTACGGCGATATCGTCTTCCAGCCCGACGCGTTGCCCGAAGCGATCGCCCGCGAGCCGCTCAGCGAGGAGCAGAAGTCCAGCCTGCTGACC TACGGCGCCGACGAACCGCTGTTGTTCGTCGGCCACTACTGGCGACGCGGCACGCCGGCGCCGATCCGGCCGAACCTGGCCTGCCTGGACTACAGCGCGG TGATGTACGGCAAGCTGGCGGCCTACCGCCTGGATGAGGAAACCCGCCTGGACCGGCACAAGTTCGTCTGGGTCGAAGTGAAGCGGCCGGAGGCTGACGA
|
|
DNA Sequence for Gene |
>NR95_RS22425
GTGAGCGCGGTGCAGGTCCTGAAGTTTCCCCTGTCGGTCGACCTGGCCGGCTTCGTCGGCCTGCTGCGGCGTCTGAACGTGCCGCACCGGGTCAGCGAGG AATCCGGCCAGCAGGTCCTCTGGGTGCCCGACGAGCGGCTCGCCGAGCAGGTCCGCGAGTTGTACCGGCGTTATCCCGAAGGCGATCCGCAGGCGACCCT GGAGGCCGCGCCGCGACCGGCGGGGCAGGGTTTCGTCCGGCAACTGCGGATGAGCCCGATGACCGCCGCGGTGTTGCTGCTGACCTTCGTCGTCGCCGCT GTCACCTACCTTGGCGACAACTTCGCGACGATGCGCTGGCTGACCTTCCAGGACTTCCGAATCCAGGGCCAGTACGCGCTGTTCACGCCGTTGGCCGAGA GCCTGGCGGCGGGTCAATGGTGGCGGCTGTTCACGCCGATGCTGATCCACTTCGGCTGGCTGCACCTGGCGATGAACGCCATGTGGTTCTGGGAGCTGGG CCGGCGCATCGAGTTCCGCCAGGGCCGCCCGATGCTGCTCGGCTTGACCCTGCTGTTCGGCCTGGTGTCCAACGTGGTGCAGTACGCGGTGAGCGGCGCC AGCCTGTTCGGCGGGTTGTCAGGGGTGCTCTATGGCCTGCTCGGGCACTGCTGGATCTTCCAGTACCTGGCGCCGAACCAGGCCTATCGCCTGCCCAGGG GCGTCGTGGCGATGATGCTGATCTGGCTGCTGGTGTGCCTGTCCGGGGTGATCGACCTGCTCGGTTTCGGCTCCATCGCCAACGGCGCGCACGTTGGCGG GTTGCTGGTCGGGTGCCTCAGCGGTTTGCTGGGCGGCCTGCTGGCGCGGCGTCGCCGTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCGAGGGGCTGCGGCAGCTTCGATGTGCGCCGCCGGCCCCGGCCCGGTAGAATGGCCGGTACGCCTTTTCACCGGAGCCGGCCATGTCGTCCTTCAACCA AGCGATCGAGAACATCACTCCAGAGATCTACCAGAACCTCAAGCTGGCCATCGAGATCGGCAAGTGGCCGGACGGCCGCAAGCTGACCCAGGAGCAGAAG GAACTCTGCCTGCAGGCGGTGATCGCCTGGGAGCTGCAGAACCTCCCCGAGGAGGAGCGCACCGGCTACATGGGCCCGCAGCACTGCTCCTCGCATTCCG ACGAGCCGATCCCGAACATCCTGTTCAAGTCGGACTCCGTGCACTGATGGAAGAAATCGCCCGCGGCGCGCTGAGCAAGATGACGGCGCGCCTGGAAAGC AATGCTCCCGTGCAATACGCCTTCCGCCTCGACGACCGCGAAGTCGCGGTGAACCCGCTGATCGGCCGGCCGCTGCGCCTGGAGTACCTCGGCAGCATCT
|
|
Amino Acid Sequence |
>peptidase S54
MSAVQVLKFPLSVDLAGFVGLLRRLNVPHRVSEESGQQVLWVPDERLAEQVRELYRRYPEGDPQATLEAAPRPAGQGFVRQLRMSPMTAAVLLLTFVVAA VTYLGDNFATMRWLTFQDFRIQGQYALFTPLAESLAAGQWWRLFTPMLIHFGWLHLAMNAMWFWELGRRIEFRQGRPMLLGLTLLFGLVSNVVQYAVSGA SLFGGLSGVLYGLLGHCWIFQYLAPNQAYRLPRGVVAMMLIWLLVCLSGVIDLLGFGSIANGAHVGGLLVGCLSGLLGGLLARRRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|