Strain | Pseudomonas aeruginosa strain AZPAE14879 AZPAE14879_contig_18, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGCTCGCCTGGCTTGGCGTCGGCTGGCTCAGCTACCTGGCCTGGAGCCTGTTCCGCAGCGCGGGCGGCATCGACGGCGCGGAGCCGCCGCGGCGCCTCG GCGTGCTCGGCGGCGCGGCGTTGCAACTGGTCAATCCCAAGGCCTGGATGATGGCCCTCGCCGCGCTGGCACTGTTCGCCGGGGAAGGCGCCGGACAGGC CGGGCGGATCGGCCTGCTGGCATTGCTGTTCTTCCTGGTTTCGCTGCCGTGCCTGGCCAGTTGGGCCTTGCTCGGCGTCGGCAGCGCGCGGCTGCTGCGC TCGCCGTCGCTGATGAAACGCTTCAACCAGGGCATGGCGCTGTTGTTGCTGGCATCGGCCTGGGCCGCCCTGCTGCTCTGAGGCGGTCCGGTAGCTTCCT GACAAACCTGTGGGTTGGTACGCCGGGCCCGGGTTGGCTATGGTGGGACGATCCGTAGCCATGGCGCGGTCGCCGTCAGCACGCCGCGCAAGGAACCTCC
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DNA Sequence for Gene |
>NR95_RS20805
ATGTTGAAACCCGACATCACTGCCTTCTTCGACCCGGCCACCTCCACCTACAGCTACGTGGTGCGCGACCCGTCCAGCCGCGCCTGCGCCATCGTCGACC CGGTGCTCGACTACGACCCGGCCGCCGGGCGCACCAGCCATGCCAGCGCCGAACGCCTGATCGCCCATGTTCGCCAGCACGACCTGCAGGTGGAATGGCT GCTGGAGACCCACGTGCACGCCGACCACCTGTCGGCGGCCATCTTCCTGCAGCGCGAACTGGGCGGGTGCCTGGCCATCGGCGCGCGAATCACCCAGGTG CAGGCGAAATTCTCCGGCCTGTTCAACCTCGGCGAGGCGTTCCCGGTGGACGGCCGCCAGTTCGAGCACCTGTTCGAGGACGGCGAGTCGTTCCGCATCG GCGCCCTGGAATGCCGCGCGCTGCATACCCCGGGGCATACCCCGGCGTGCATGACCTACCTGGTCGGCGACAGCGCCTTCGTCGGCGATACCCTGTTCAT GCCCGACTACGGCACCGCCCGCTGCGATTTCCCCGGCGGCGACGCGCGCCAACTGTATCGCTCGATCCAGCGCCTGTTCGCGCTACCCGACGCGACCCGC CTGTTCATGTGCCACGACTACACGGCTCCCGGCCGCGACGAGCACCGCTGCGAAACCAGCGTCGGCGAGCAGCGCCGGCACAACGTGCACGTCCGCGAAG GCGTCGACGAGGAGGCGTTCGTCGCCATGCGCCAGCAGCGCGATGCCACCCTCGGCATGCCAACCCTGATGCTGCCGGCGATCCAGGTCAACATGCGCGG CGGCAACCTGCCGCCGGTGGAAGGCAACGGGGTGCGTTACCTGAAGATCCCGCTGGATCTGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCAGCTGCGGCGACGCAGCAGGAGAATGAAGAACAGCCCGCCGATGGCCGCGGTGGCGATGCCGATGGGCAGGTCCTGGGGGGCGATCAGGGTGCGCGCG GCGACATCCATCCAGACCAGGAACAGCGCGCCGAGCAGGGCGCACACCGGCAGCAGTCGGCGGTGCTCGGCACCCACCAGCAGGCGCGCGGCGTGCGGCA GCATGAGACCGACGAAGCCGATGGCGCCGCTCACCGAGACCAGCACGCCGGTCAGCAGCGAGCAGCAGACGAAGACCCACAGGCGTACGCGACGGGCGTC CAGGCCGAGGGTCACGGCGGTCTGTTCGCCGGCCATCAGCGCGTTCAGCGCACGGCCCAGCCCGAGCAGTACCAGCAGGCCGCCGGCCACGCACAGCGCC GGCAGCCAGATCAACGACCAGCGCGCCAGGCCGAGGCCGCCGAGCATCCAGAACAGCACAGAGGAGGCGGCGCGGTGGTCGCCGAGGAACAGCAGCAGGT
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Amino Acid Sequence |
>beta-lactamase
MLKPDITAFFDPATSTYSYVVRDPSSRACAIVDPVLDYDPAAGRTSHASAERLIAHVRQHDLQVEWLLETHVHADHLSAAIFLQRELGGCLAIGARITQV QAKFSGLFNLGEAFPVDGRQFEHLFEDGESFRIGALECRALHTPGHTPACMTYLVGDSAFVGDTLFMPDYGTARCDFPGGDARQLYRSIQRLFALPDATR LFMCHDYTAPGRDEHRCETSVGEQRRHNVHVREGVDEEAFVAMRQQRDATLGMPTLMLPAIQVNMRGGNLPPVEGNGVRYLKIPLDLF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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