Pseudomonas aeruginosa AZPAE14879, NR95_RS16190

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14879 AZPAE14879_contig_14, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCACCAGGCGGTGGACCACCTGCTGCTCACCGGGTGCGGCAGGCGTAACGACGTACGCTGGCAGGGCGGGCTGGCCGCGCACGTGCGGCGGCGCCTGGCC GACTACATCGAAAGCCACCTGGAGCAGCCGCTGGAACTGGGGTCGCTGGCGGAGCTGGCGGCGCTCTCCGAGTACCACTTCGCGCGCATGTTCCGCGTCT CCTTCGGCCTGCCGCCGCACCGCTACGTGCTGGAACGACGCCTGGCGCGGGCCCGCGACCTGCTGGCGTACTCCGCGCAGTCGCTCCAGGAGGTCTCGCT GGCCTGCGGCTTCGCCAGTCCGAGCCATTTCAACCGGCGCTTCCGCGAAGCGCATGGCGCCACCCCGGGGCAGTACCGCGCCGCCCTGAAAGCCTCCTGA AAGCCAGGCGCCGACAGCCTGCGGTTGTAGGCAGGCATTCCCGCAGCATAAAATGATAACTATTATCATTCGTTAATCCTTCTGCTCCGGGAATGTCCAG
DNA Sequence for Gene
>NR95_RS16190
GTGTCGAGCGCCGACCTCGCCCACGCGGCCGCGTTGCATACCCTCTACAGCGACCACCACCACTGGCTCACGGGTTGGCTGCGGCGCCGCCTCGGCTGCC CGCAGAACGCCGCCGACCTGGCCCAGGACACCTTCGTCAAGGTCCTGGTTTCGCGCCAGGCCGCGCGCATCGACGAACCGCGCGCCTTCCTCACCACCAT CGCCCGCCGCGTGCTGTGCAACCACTACCGCCGCCAGGACGTCGAGCGCGCCTACCTGGAAGCCCTGGCCAGCCTGCCCGAGCGGGAAGTCCCCAGCGAA GAGACCCGCGCCATCGTCCTGGAGACCCTGGTCGAGCTGGACCGTCTGCTCGACGGTCTGCCGCCGCTGGCCAAGGAGACCTTCCTGCTGGCCCAGCTCG ACGGCCTGGGCTACGCCGAGATCGCCACGCAGCTGGGCATCTCCCTGAGCAGCGTCAAGCGCTACATGCTCAAGGCTGCGCAACGCTGCTACTTCGCCGA GCTGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTGCCCGCCGCACCCAAGGTGCCGCCGCAGGTGGCTGAACAGGCCGTGCGCTGGCTGGTCGAGCTGCAGGGCGGCGCCGACGACGAACGCCTGCGCCA GGCCTTGGAGTGCTGGCGCCAGGCGGCCCCGGAACACGAGCAGGCCTGGCGCCACATCGAGGCGGTCAACCAGCGCCTGGCCGGGATAGGCACGCCACTG GCCCTGGCCGCCATCAACGCACCGCATTCGCCGCAACGCCGGCGCGCGCTGAAGACCCTGCTGCTGGTCCTGGCCGCCGGCGGCAGCGCCTGGGGCCTGC GCGAGAGCGGCAGCCTGCAGCGCTGGAGCGCCGACTATGCCACCGGCGTCGGCGAACGCCGGCGCCTGGCCCTGGCCGACGGCAGTCGCCTCGAGCTGAA CAGCGACACGGCGGTGGATGTCCGCTTCGATGCCGGCGAACGGCGCCTGCTCCTGCTGCGCGGGGAAATCCAGCTCAGCACCGGCCAGGACCCGCGCCCG
Amino Acid Sequence
>RNA polymerase sigma factor
MSSADLAHAAALHTLYSDHHHWLTGWLRRRLGCPQNAADLAQDTFVKVLVSRQAARIDEPRAFLTTIARRVLCNHYRRQDVERAYLEALASLPEREVPSE ETRAIVLETLVELDRLLDGLPPLAKETFLLAQLDGLGYAEIATQLGISLSSVKRYMLKAAQRCYFAELP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site