Pseudomonas aeruginosa AZPAE14880, NR96_RS31840

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14880 AZPAE14880_contig_63, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
DNA Sequence for Gene
>NR96_RS31840
GGGCAGCCTGGCCAACGCCGGCGGGCGCATCCTCCATACCGGCAACGGCACCTTCGGCCTGGATTCCGGGCAGGTGATCCGCGCCGGCGGGGAACTGACC ACCAATGGCCTGCTGGACATCCGCGCCAGCGAATGGACCAACAGCAGCGTGCTGCAAGCCGGACGCCTGAACCTGGACATCGGCACCTTCCGCCAGACGG CCGAGGGCAAGCTGCTGGCGGTGCAGTCCTTCACTGGCCGCGGCGGCGACTGGAGCAACGACGGCCTGCTGGCCAGCGACGGCAGCTTGCGCCTCGAGCT GAGCGGCGGCTACCGTGGCAACGGCCGCGCCACCAGCCTCGGCGACTTCGCCCTGAACGCCGCCAGCCTCGACCTCGGCAATGCCGCCAGCCTCGCCGGC GGCGCCAATGTCACGCTCGGCGCCGGCAACCTGCTGGTCAACCGTGGGCGGATCACCGCCGCCGGCGACCTCGTGGCCAGCGCCGCGAGCCTGAACAACT ACGGCACCCTGGGCGGCGGCGGCAACCTGCGATTGAACGCGCCCGCCCTGCTCAACGAGCGCGGGTTGCTGTTCAGTGGCGCCGACATGACCCTGCGCGC CGGCGACATCACCAACCTCTACGGGGATGTGTACAGCCTCGGCAGGCTGGATATCGCCCGCGACGATGCCGGCAACCGTGCCGCCAGCCTGCGCAACCTT TCCGGGGTGATCGAGAGCGGCAAGGACTTCAGCCTGCGTGCCAGCCTGATCGAGAACCGTCGCGCCGTGCTGGAAAGCAAGTCGGGCCTGTACACCGCGA AGATGGAGCAGACCGCCTGCATCGAAGGCGTCAACGCGGGCGACTGCAGCGGCAAGCGCAACGCCATCTGGACCATCACCCAGCGCGACAAGACCGAGGT CACCGCCAGCAGCGCCATGGGGCAACTGCTGGCCGGAGGCGACTTCGCCATCGACGGCGGCACCCTGAACAACCTTTCCAGTCTGATCGGCAGCGGCGGC AACCTCACCGCCAACCTCGAAGTCCTCGACAACCAGGGCCTGGAAACCGGCGAGCTGGAAACCATCCGCGTGCTGCGTACCGCTCGCGGCGGCGATATCG GCGGCATCGACCAGAAGTCGCGCAACTTCACCAACCTCTACTGGTACCAGAGCGCCAATTTCGACCCGGCGCGCGCGGGCGAGATTCCCGCCGCGCTCAA CGCGATCCTCAGCGACTGGTCCTTCGAGTACGAATTCCCGAGCAAGGGGCCGACCCCGATCAGCAGTGGCGACCAGTCCTACGCAGCGGTGATCCAGGCC GCCGGCGACGTCACGGTCAATGCCAGCACGCGCATCGACAACGGCGTCACCCGCCCCGGCTACACCTTCGTCGGCAGCGGCCGCCAGGTGGGCGACAGCG CGGTGGGCGGCAGCGGGGTTTCGGTGGTCGTGCCGCTGACCTCGCAACTGCCGTCCGACCTGGCGCGGCGCCAGGTCAACCCGGTTACCCTGCCCGGCTT CAGCCTGCCCCAGGGCGACAACGGCCTGTTCCGTCTCAGCTCGCGCTTCGCCGAGGACGGCAATGGCAGCGCCGCGCTCGGTGCCGGCGCCGACCGCACC CAGGGCGGCAGCGGCGTCTCGGTCGGCCAGCAAGGCGCCGGCAACGTCGCCGGTACCTGGCAGGGCCAGGGCGTGCGAGTCGACGGCCTGGCTGGCGCGG CCAACGTCCAGGGTCAGGGCGGCAGCACGCTCGGCGGTAGCCTGCCGGGCGTCGCCCGGGTCCAGGGCGTGCCCGGCAACGCCACGCCGAGCGCCAGCCA CAAGTACCTGATCGAGACCAACCCGGCGCTCACCGAACTGAAGCAGTTCCTCAACTCGGACTACCTGCTCAGCGGCCTGGGCATGAACCCGGACGCTAGC AAGAAGCGCCTCGGCGACGGTCTCTACGAGCAGCGGCTGATCCGCGACGCGGTGGTGGCGCGCACCGGCCAGCGCTACATCGATGGGCTGAGCAGCGACG AGGCGCTGTTCCGCTACCTGATGGACAACGCCATCGCTTACAAGGACAAGCTCCAGCTGCAACTGGGCGTGGGTCTGAGCGCGGAGCAGATGGCGGCGCT GACCCACGACATCGTGTGGCTGGAAGAGGTCGAGGTGAACGGCGAGAAGGTCCTCGCGCCGGTGGTCTACCTGGCCCAGGCGGAGGGTCGGCTGGCACCC AACGGTGCGCTGATCCAGGGCCGCGACGTGAAGCTGGTGAGCGGCGGCGACCTGCATAACGTCGGCACCCTGCGCGCGCGGAACGACCTCTCGGCGACGG CCGACAACCTCGACAACAGCGGCCTGATCGAGGCCGGCAAGCGCCTCGACCTGCTCGCCGGCGACTCGATCCGCAACCGCCAGGGCGGGGTCATCGCCGG GCGTGACGTGAGCCTCACCGCGCTGACCGGCGACGTGATCAACGAACGCAGCGTGACCCGCTACGACAGCGCGCTCGACGGCCGCACCTGGGAACGCAGC TTCGCCGACAGCGCCGCGCGGGTGGAGGCGGCGAACAGCCTGAACGTCCAGGCCGGACGCGACATCGCCAACCTCGGCGGGGTGCTGCAGAGCCGCGGCG ACCTCAGCCTCGACGCCGGACGCGACGTCACCGTCGCCGCCGTCGAGGACCGCCAGGGCCAGACCCGCTGGAGCACGTCGCGGCTCCAGAGCGTGACCCA GCTCGGTGCCGAAGTCAGTGCCGGGCGGGACCTGAACGTCAGCGCCGGGCGCGACCTCAGCGCAGTGGCCAGCGCCCTCGAAGCGCGCCGCGACATCGCC CTCTCCGCCGGGCGCGACGTGACCCTGGCGGCGGCGGCGAACGAGGAGCACAGCTTCGCCACCGGCAAGAAGGTGACGGCGAAGAACGATCAGGTGGAAC ACCAATCGACCGTGGTCAGCGCCGGCGGCGATCTCAGCGTGCAAGGCGGCAATGACGTGACCTTCGTTGCCAGTCAGGCGAAGGCCAGCAACGAGGCCTA TCTGTACGCCGGCAACGACCTCAATCTGCTGGCGGCTCACGACGAAAGCTATTCCTACTACTCGAAGAAGAAAAAAGGCTCGTTCGGGCGCAGCAGTAGC CGGATGAGCGAGAGCGAAGCCAGTACCGTGGTGTCGTCGTCGATCCAGGCGGGACAAGGGGCGGAACTGGTCGCCAAGCGTGACGTCAACGTCGAGGCCT CTTCCGCCTCCAGCACGAAGGGCGAGCTGGCGGTCGTGGCGGGGCGCGATGTGAACCTCACGGCAGCTGAGAACAGCTAC
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCAGCGTGTCCGCGAAATCCAAGTCCGGAGGCTTGGGGCTGTCATCCACCAGCAAGGCCAACGCCCAGTCCTCTTCCTACACCAGCGTTCAGGGCGCCA CGTTGAGTGGCGATACCACCGTGGTGCAGGCGGGAAGGGACATCTCGGTGGCCGCCAGCAATGTGGTTTCTACCGGGAAGACTGCGCTGCGTGCCGGCAA CGACATCATCATCGACAGCGTGGCGGAGACGTCGGAGTCGCATCGCAGCGAGTCGAAGAAGAAGTCCGGCCTGATGAGTTCCGGAGGGATCGGCATCACG CTCGGCACGGCGAAGAATGCCTCGACACAGGACACCCGTACCGTCGTCAACCAGGGCAGCACCATCGGCAGTGTGCTCGGCGATGTCGACATGCGGGCGG GCAAGAACCTGTCTATCACGGCTTCGGATGTGGTGGCCGGCAAGGACATCAACCTCGTCGGGCAGAACGTGAGCATTCTCGCTGCCGACAACCAGAACGT
Amino Acid Sequence
>hemagglutinin
GSLANAGGRILHTGNGTFGLDSGQVIRAGGELTTNGLLDIRASEWTNSSVLQAGRLNLDIGTFRQTAEGKLLAVQSFTGRGGDWSNDGLLASDGSLRLEL SGGYRGNGRATSLGDFALNAASLDLGNAASLAGGANVTLGAGNLLVNRGRITAAGDLVASAASLNNYGTLGGGGNLRLNAPALLNERGLLFSGADMTLRA GDITNLYGDVYSLGRLDIARDDAGNRAASLRNLSGVIESGKDFSLRASLIENRRAVLESKSGLYTAKMEQTACIEGVNAGDCSGKRNAIWTITQRDKTEV TASSAMGQLLAGGDFAIDGGTLNNLSSLIGSGGNLTANLEVLDNQGLETGELETIRVLRTARGGDIGGIDQKSRNFTNLYWYQSANFDPARAGEIPAALN AILSDWSFEYEFPSKGPTPISSGDQSYAAVIQAAGDVTVNASTRIDNGVTRPGYTFVGSGRQVGDSAVGGSGVSVVVPLTSQLPSDLARRQVNPVTLPGF SLPQGDNGLFRLSSRFAEDGNGSAALGAGADRTQGGSGVSVGQQGAGNVAGTWQGQGVRVDGLAGAANVQGQGGSTLGGSLPGVARVQGVPGNATPSASH KYLIETNPALTELKQFLNSDYLLSGLGMNPDASKKRLGDGLYEQRLIRDAVVARTGQRYIDGLSSDEALFRYLMDNAIAYKDKLQLQLGVGLSAEQMAAL THDIVWLEEVEVNGEKVLAPVVYLAQAEGRLAPNGALIQGRDVKLVSGGDLHNVGTLRARNDLSATADNLDNSGLIEAGKRLDLLAGDSIRNRQGGVIAG RDVSLTALTGDVINERSVTRYDSALDGRTWERSFADSAARVEAANSLNVQAGRDIANLGGVLQSRGDLSLDAGRDVTVAAVEDRQGQTRWSTSRLQSVTQ LGAEVSAGRDLNVSAGRDLSAVASALEARRDIALSAGRDVTLAAAANEEHSFATGKKVTAKNDQVEHQSTVVSAGGDLSVQGGNDVTFVASQAKASNEAY LYAGNDLNLLAAHDESYSYYSKKKKGSFGRSSSRMSESEASTVVSSSIQAGQGAELVAKRDVNVEASSASSTKGELAVVAGRDVNLTAAENSY
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site