Pseudomonas aeruginosa AZPAE14880, NR96_RS31835

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14880 AZPAE14880_contig_63, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGATGTCGAGTGAATCAGTTCTCTCAAAAAGTCGGAATTAAGTGTCGGGGTAATATGTCTAGTCATTATTAGTCACCGGCACCTGCTGCATCGAAAGTGG GTTTGTCACAAGAAAATTTTTCTCCGCATGATGACTAATGGAAGCCATGATTGACGATTCGATTTTTGAAAAAATTGATAATCTGATTGGCAGGTTGTCA GTCAGTAGGTCTACGGTAGATGAAAATGAGCTTTGCCGTGTTGCGAGGGTTTTGCCTGGCGATAGGGAGTTAGATGTTATAGAGAGGCTGAAAAACAAAG GGGACGTATTTATTTTTGCTGCTCTAAAGATAAAAGGCAGGTAGGTTTTCCCTGTTCAGTAATTTCTTGCTCTTTAAAAATTTACCTTTTCGATTTAGAA GAAGAGCACCGTGCAAGACCTCCCTGTCGCCACATCCGCAGAGTCCTGAACCCCCGGCCCTGTCATCCCTGACGGGTCGCTCGCCGGGGCAACGCATGCC
DNA Sequence for Gene
>NR96_RS31835
TTGCCTGTTTCCGGCTCGCCCTACAAGGACCAACTGCACCTGCAACTGGGTGTGGGTCTGAGCGCGGAGCAGATGGCGGCGCTGACCCACGACATCGTCT GGCTGGAAGAGGTCGAGGTGAACGGCGAGAAGGTCCTCGCGCCGGTGGTCTACCTGGCCCAGGCGGAGGGTCGGCTGGCACCCAACGGTGCGCTGATCCA GGGCCGCGACGTGAAGCTGGTGAGCGGCGGCGACCTGCATAACGTCGGCACCCTGCGCGCGCGGAACGACCTCAGCGCGACAGCCGACAACCTCGACAAC AGCGGCCTGATCGAGGCCGGCAAGCGCCTCGACCTGCTCGCCGGCGACTCGATCCGCAACCGCCAGGGCGGGGTCATCGCCGGGCGTGACGTGAGCCTCA CCGCGCTGACCGGCGACGTGATCAACGAACGCAGCGTGACCCGCTACGACAGCGCGCTCGACGGCCGCACCTGGGAGCGCAGCTTCGCCGACAGCGCCGC GCGGGTGGAGGCGGCGAACAGCCTGAACGTCCAGGCCGGACGCGACATCGCCAACCTCGGCGGGGTGCTGCAGAGCCGCGGCGACCTCAGCCTCGACGCC GGACGCGACGTCACCGTCGCCGCCGTCGAGGACCGCCAGGGCCAGACCCGCTGGAACACGTCGCGGCTACAGAGCGTGACCCAGCTCGGCGCCGAAGTCA GTGCCGGGCGGGACCTGAACGTCAGCGCCGGGCGCGACCTCAGCGCAGTGGCCAGCGCCCTCGAAGCGCGCCGCGACATCGCCCTCTCCGCCGGGCGCGA CGTGACCCTGGCGGCGGCGGCGAACGAGGAGCATGCCTACAGCAAGACCAGGAAGGTCACCTACCAGGAAGACAAGGTTGCCCAGCAAGGCACCCGCGTG GACGCCGGCGGCGACCTGGCGATCAATGCCGGACAGGACCTGCGCCTGATCGCGAGCCAGGCCAGCGCCGGCGACGAGGCCTACCTGGTGGCCGGCGACA AGCTGGAACTGCTGGCCGCCAACGACAGCAACTACTACCTGTACGACAAGAAGAAGAAAGGCGACTTCGGCCGCAAGGAAACCCGGCGCGACGAAGTCAC CGACGTCAAGGCGGTGGGCAGCCAGATCAGCAGCGGCGGCGACCTCACCCTGCTCAGCGGCGGCGACCAGACCTACCAGGGCGCGAAGCTGGAATCGGGC AACGACCTGGCCATCGTCAGCGGCGGCGCGGTGACCTTCGACGCGGTGAAGGACCTGCACCAGGAGAGCCATGAGAAGAGCAAGGGCGACCTGGCGTGGC AGTCGTCGAAGGGCAAGGGCCAGACCGACGAAACCGTGCGCCAGAGCCAGATCGTGGCCCAGGGGAATCTGGCGATCAAGGCCGTGGAAGGGCTGAAGAT CGACCTCAAGCATATCGACCAGAAGACCGTGAGCCAGACCATCGACGCGATGGTGCAGGCGGATCCGCAACTGGCGTGGCTGAAGGAGGCCGAGCAGCGC GGGGATGTGGACTGGCGCATGGTGCAGGAGGTGCACGATAGCTGGAAGTACAGCAACTCGGGGCTGGGGGCTGCGCCGTCACTGGCCATTGCCATCGTTG CGGCTGCTTACCTCGGCCCGGTGTATGGCGCAATGGCCAGCAACCTCGCCATTGGCACCATCAACAATGGCGGTGACCTTGGCAAGGGGCTGCAACAGGC CACCAGCGCTGACAGTCTGAAAGGGTACGCCATCGCAGCGGCCACGGCTTATCTCGTCAGCCCGCAGTTGGACAAGGCATTCGGCGTATCCAGTGACAAC ATCAACAAAGTCACCAAAGGATTCAAGCTCAGCACAGTTGAGGGAATCGGTGGATTTGCTGCCTACAGCATTGCCCAAGGCTTTGCTCAATCGGTCATGC AGCAGGCCGCCTATGGCGGCAGCTACATCGACAACCTCGGTAATGCCATGGCAGGTCAGGCGCGCAACCTGGGAATGGCGGTAGGTTTCAATTTCATTGG CGACTCGGTCAAATACCCTGATGGCAGCCCGCCGAAAATCATGGCTCACGCCCTGATGGGAGGTCTGCTGGCCGAAGCCTCCGGCAGTGACTTCAAGACT GGAGCGGCGGCCGCTGGTGCCAACGAGGCCATGATCAACCTCCTTGGGAAAATGGTAGGTGGCGATCAAAACCTCGAACTGATGGCCTCGCAACTCGTTG GCGTAGCCGCGGCAAGTGCGGTCAATGGCGATGTGAGTCTGGGCGCCGAGATCGCCAAAAGCGGGACGGCGTACAACCGGCAGCTACACCCAGATGAAAT CAAATTCGCATCGGATGTGGAGCGCGTCAAACGTTATGCCCAGGAAAATGGGCTGAGCGAGGACACCGCCCGCAAAGAGCTTCTCAGCACGGCCGCCATG ATGGTGGACAATGGCTGGAACCAGGCCTTGGCCGGCACAGACATCAACGCTGCCCGGGCTGCTCAGTATCTGCGTACGGAGCTGGGCACAGGCCCGGACA GCAATCTCTTCCAGGTGACCCAGGCTGACTACTACAACGAGCGGGTGGGGCTGACGGCGCTATTCAAGAACAAGGAGGCCCTGACCAGCGTTCTGGAAAA CATAGCCCTAGCGAATCCCGCGAGCTATACGAGGGACCCCGCGAACCGTGCGGAAGTGCTGAATGCCAAAGGTGAAGGTAGCCAAGCGGGCTTTGGGCTG GCACTGGAAGGGATCGTCAGCGCGCCTTCAAAAACTGCCTTGTGGTTGATGGGTGCGCTAACCTGTTCAAGCTGTGCGGAGCGGGATATCCAGAACGCTT GGAACTCGGTTGCCTCGTTACCTGAAGACATCCGTATGAAAGGCTATCTGGATGCCTTGCACACCATGCAAGGCCAGGGTGCCAGCGTGGTGCGGGACAA CGCCGCGAGTTCGACTGCATTGGGAGTTGAGGTTGGGCTGGCCATTGATGGAGGGTTGGCAGGGGCAGGCAAGGGCGTCGTTACGGATGGTCCGAAAGGA ATACTTACACTGAAAGATTTTCCTGATGTCTCTACCAAGATAAGCCAGAAGCAGCTTCGCCATATTGCTGGAACACAGCAGCTTGAGGCACGGGGAGGCG GTGGTTTCTTAAACAGTGTCTCTGATGCTCAAAAAGTGCTTGATGCCTACCATACCGGCCAAGTGAAAATCCTAGGGAGAAATGCTCAGGGATTCCCAGT AGTCAAGTTTGAGGGCGTTACTGGAACTAACGTTAATCTCGGTGTTGGTATAACTGATCAGGCAACCAATGTATTTATTATCAAGGGCACAAAGAGTCCA AGTATTGTCCCTACAAATCCAAACTGGAGTCCCAAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTAGCCAGCCAACGTTGGAAGAATGGAATTTTCAAGTGTTAATGCTAATTCAAGCGTTGGTAGGTGCGATATCTGCCAATTTTAGAATGATTGCATTGTT ATGGGATGGCGATGAGTGGGTATTGAGATTTTATCTTGAAGAGAGCAACGAAGAGGACGTTGAGGAGATTGAGGATGTTGTTTGCCAATATACGGCATAT CAGGGCTCTAGTTTGAGATGCAGGTCTGAGTTGATCGTGGGGCGTGAACGCCTTCCGGGGCTTTCGGAGGTGGGTAGGGTTGTATACCGTCGCAGAGAGT CTTTTGATATTTAGTTGGGGCAAAAGGTAGCTCCGGCGCAGAAAGTGCTATCAATCAAGGCAGGCTTAATTCTCAGCTCCTGTCTGAGGAGGTTGCGAAT GGCCACGCGTTCCAGAAACATTTAGTCGAACGGCAAGAGTTTGTTGATCTTGCGCCAACAGCATAAAGGGGACAGATTAACAGCATAAAGGGGACACATA
Amino Acid Sequence
>hemagglutinin
MPVSGSPYKDQLHLQLGVGLSAEQMAALTHDIVWLEEVEVNGEKVLAPVVYLAQAEGRLAPNGALIQGRDVKLVSGGDLHNVGTLRARNDLSATADNLDN SGLIEAGKRLDLLAGDSIRNRQGGVIAGRDVSLTALTGDVINERSVTRYDSALDGRTWERSFADSAARVEAANSLNVQAGRDIANLGGVLQSRGDLSLDA GRDVTVAAVEDRQGQTRWNTSRLQSVTQLGAEVSAGRDLNVSAGRDLSAVASALEARRDIALSAGRDVTLAAAANEEHAYSKTRKVTYQEDKVAQQGTRV DAGGDLAINAGQDLRLIASQASAGDEAYLVAGDKLELLAANDSNYYLYDKKKKGDFGRKETRRDEVTDVKAVGSQISSGGDLTLLSGGDQTYQGAKLESG NDLAIVSGGAVTFDAVKDLHQESHEKSKGDLAWQSSKGKGQTDETVRQSQIVAQGNLAIKAVEGLKIDLKHIDQKTVSQTIDAMVQADPQLAWLKEAEQR GDVDWRMVQEVHDSWKYSNSGLGAAPSLAIAIVAAAYLGPVYGAMASNLAIGTINNGGDLGKGLQQATSADSLKGYAIAAATAYLVSPQLDKAFGVSSDN INKVTKGFKLSTVEGIGGFAAYSIAQGFAQSVMQQAAYGGSYIDNLGNAMAGQARNLGMAVGFNFIGDSVKYPDGSPPKIMAHALMGGLLAEASGSDFKT GAAAAGANEAMINLLGKMVGGDQNLELMASQLVGVAAASAVNGDVSLGAEIAKSGTAYNRQLHPDEIKFASDVERVKRYAQENGLSEDTARKELLSTAAM MVDNGWNQALAGTDINAARAAQYLRTELGTGPDSNLFQVTQADYYNERVGLTALFKNKEALTSVLENIALANPASYTRDPANRAEVLNAKGEGSQAGFGL ALEGIVSAPSKTALWLMGALTCSSCAERDIQNAWNSVASLPEDIRMKGYLDALHTMQGQGASVVRDNAASSTALGVEVGLAIDGGLAGAGKGVVTDGPKG ILTLKDFPDVSTKISQKQLRHIAGTQQLEARGGGGFLNSVSDAQKVLDAYHTGQVKILGRNAQGFPVVKFEGVTGTNVNLGVGITDQATNVFIIKGTKSP SIVPTNPNWSPK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site