Pseudomonas aeruginosa AZPAE14880, NR96_RS05355
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14880 AZPAE14880_contig_5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGAGGAGCAGAGCTTTGGCGTCCATGTCGGGGGTTCGCTGGGGATGGAAAGGGCATCATGGCTGAGGTGGCTTTATTCGTCGAACGATGGCTGGCCGTGC CGGTAGATCGGCCAAGACTTCATGCGCTGCGGAAACGGCCTGACCAAGTGCAGCGGCTTGCAATCAAAAACGCTGGGCTCGCAATCAGCGTGGTTTTGTC CGGAAGCTCGCGAAGGGGCGGCATGGATGAATTTTGAAAGTGGGAGTTCGTTAATGAACTGAAGGTATGCGGCTTCCGTGACTGGCCGGGGTAGATGAGG TGTGCGTTCAGGAAATGACCGTTTGACGCAGGCGCGATTATAAGAGGCGAGAGAGCGCACCTTCTGGATCATCTAAACACGGGATATTGAAGTTGATTGC AGTGTATTGCCGATGCATTGGGGCTTATTGACTGGGAGAGGGTTCTCTAGGTGGGGGTCGCTCAATACATTACACTTTCAAATTAATGTAGGGGCGATCT
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| DNA Sequence for Gene |
>NR96_RS05355
ATGGCTGTCAATGATTACGAACCTGGTTCGATGGTTATTACACATGTGCAGGGTGGTGGGCGTGACATAATCCAGTATATTCCTGCTCGATCAAGCTACG GTACTCCACCATTTGTCCCACCAGGACCAAGTCCGTATGTCGGTACTGGAATGCAGGAGTACAGGAAGCTAAGAAGTACGCTTGATAAGTCCCATTCAGA ACTCAAGAAAAACCTGAAAAATGAAACCCTGAAGGAGGTTGATGAAATCAAGAGTGAAGCGGGGTTGCCAGGTAAAGCGGTCAGTGCCAATGACATCCGC GATGAAAAGAGTATCGTTGATGCACTCATGGATGCCAAAGCAAAATCGCTAAAGGCCATTGAGGATCGCCCGGCCAATCTTTATACGGCTTCAGACTTTC CTCAGAAGTCAGAGTCGATGTACCAGAGTCAGTTGCTGGCCAGCCGAAAATTCTATGGAGAGTTCCTGGATCGCCATATGAGTGAGCTGGCCAAAGCGTA CAGCGCCGATATTTATAAGGCGCAAATCGCTATCTTGAAACAAACGTCTCAAGAGCTGGAGAATAAAGCCCGGTCATTGGAAGCAGAAGCCCAGCGAGCC GCTGCTGAGGTGGAGGCGGACTACAAGGCCAGGAAGGCAAATGTCGAGAAAAAAGTGCAGTCCGAGCTTGACCAGGCTGGGAATGCTTTGCCTCAACTGA CCAATCCAACGCCAGAGCAGTGGCTTGAACGCGCTACTCAACTGGTTACGCAGGCGATCGCCAATAAGAAGAAATTGCAGACTGCAAACAATGCCTTGAT TGCCAAGGCACCCAATGCACTGGAGAAACAAAAGGCAACCTACAACGCCGATCTCCTGGTGGATGAAATCGCCAGCCTGCAAGCCCGGCTGGACAAGCTG AACGCCGAAACGGCAAGGCGCAAGGAAATCGCTCGTCAAGCGGCGATCAGGGCTGCCAATACTTATGCCATGCCAGCCAATGGCAGCGTTGTCGCCACCG CCGCAGGCCGGGGTCTGATCCAGGTCGCACAAGGCGCCGCATCCCTTGCTCAAGCGATCTCCGATGCGATTGCCGTCCTGGGCCGGGTCCTGGCTTCAGC ACCCTCGGTGATGGCCGTGGGCTTTGCCAGTCTGACCTACTCCTCCCGGACTGCCGAGCAATGGCAGGACCAAACGCCCGATAGCGTTCGTTACGCCCTG GGCATGGATGCCGCTAAATTGGGGCTTCCCCCAAGCGTAAACCTGAACGCGGTTGCAAAAGCCAGCGGTACCGTCGATCTGCCGATGCGCCTGACCAACG AGGCACGAGGCAACACGACGACCCTTTCGGTGGTCAGCACCGATGGTGTGAGCGTTCCGAAAGCCGTTCCGGTCCGGATGGCGGCCTACAATGCCACGAC AGGCCTGTACGAGGTTACGGTTCCCTCTACGACCGCAGAAGCGCCGCCACTGATCCTGACCTGGACGCCGGCGAGTCCTCCAGGAAACCAGAACCCTTCG AGTACCACTCCGGTCATACCGAAGCCGGTGCCGGTATATGAGGGAGCGGCCCTCACACCGTTGAAGACCGGCCCGGAGTCCTATCCGGGAATGCTACTGG ACCTAAACGATCTGATCGTGATTTTCCCGGCGGATTCTGGAGTCAAACCTGTTTATGTAATGCTCAGTAGTCCTCTTGATAGTGGTATCTTCACACGGAG GCAACTACAGAAAAAATTTGATAGCCACAAATATGATTTTGGGCTGGGTGAAAAAAGCGCCAACAATGGAACGCTTGCAGAGTTTAGGGATAAAATTCTT GAGCACCTTGCCGATCCTGCAACCGTAGAAAAAGGGACTTACCACTCCGAAGTAAACTCAAAAGTACATTACAATGCCAGGACTAATATTGTTGTTATCA TTGGAGAGGATGGGATGTTTGTTTCTGGGTGGAGGATTGAACCTGGCACGGATCAATACAATTTTTACATGAAAAATGAGGTGCTTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GATGAGCATGGAAATGATAGATATTGCAAAGAGGCTATTAGCCTCATCGATTGACGGGAAAACTTTCAGCGAAGAATTTTTTAAGACTTGGAGGTCCGAG CGCGATTCAGGGGTGCTGGCCCAAGATGATGCATCGCTTGGGAGATGCTTGAGTTTAATGTTTGGTCTGGCCGACAGCTTTACCGAGGGAAAGAAAGAGC GCCCAGGTGAACTTACAGAGGGTGAACTTAAAATAGCTCTGAGTGATTTATTGAAAGAATACAAATACATATAATAAGCCGAACTTTAGTAGGCGTAGAC AGAGGCCTCTGTGAGGGGCTTCTGTCTTCTCGTAGAGAGTGGCTTCCCGTCTCGAGATGCAGAAGCACGTCGACTACTAGCAAGATAAACCATAAAAGCC TGGTAGAGCAGTTCGATGCCAAGCCTACGGAGGTTAGTGCGTTGTTCAGCAATACGCTGGACCCGGCGCGAGCGACCGAGTTGCAGGAAAAGATGCAAAG
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| Amino Acid Sequence |
>pyocin S2
MAVNDYEPGSMVITHVQGGGRDIIQYIPARSSYGTPPFVPPGPSPYVGTGMQEYRKLRSTLDKSHSELKKNLKNETLKEVDEIKSEAGLPGKAVSANDIR DEKSIVDALMDAKAKSLKAIEDRPANLYTASDFPQKSESMYQSQLLASRKFYGEFLDRHMSELAKAYSADIYKAQIAILKQTSQELENKARSLEAEAQRA AAEVEADYKARKANVEKKVQSELDQAGNALPQLTNPTPEQWLERATQLVTQAIANKKKLQTANNALIAKAPNALEKQKATYNADLLVDEIASLQARLDKL NAETARRKEIARQAAIRAANTYAMPANGSVVATAAGRGLIQVAQGAASLAQAISDAIAVLGRVLASAPSVMAVGFASLTYSSRTAEQWQDQTPDSVRYAL GMDAAKLGLPPSVNLNAVAKASGTVDLPMRLTNEARGNTTTLSVVSTDGVSVPKAVPVRMAAYNATTGLYEVTVPSTTAEAPPLILTWTPASPPGNQNPS STTPVIPKPVPVYEGAALTPLKTGPESYPGMLLDLNDLIVIFPADSGVKPVYVMLSSPLDSGIFTRRQLQKKFDSHKYDFGLGEKSANNGTLAEFRDKIL EHLADPATVEKGTYHSEVNSKVHYNARTNIVVIIGEDGMFVSGWRIEPGTDQYNFYMKNEVL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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