Pseudomonas aeruginosa AZPAE14880, NR96_RS30620
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14880 AZPAE14880_contig_48, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCTTGCAACTGCTGTTCTGGCTGCTCCCTTGCTGGCGCATGCCGACCTGAAAGCCATGGACGATGGCGCGCTGTCCGACGTGACCGGCCAGGCAGGCAT CAGCATTTCCGGTACTTTCCAGGGCTCCGTCGGGGCCGTGACCTACACCGATACCGACACCAACGGCGGCTCCCTGCGGCTGGAGAACATCAGCCTGCCG GCGCTGACCATCGACGATACCAAGCCGCTGACCATCGACGTCGTCACCACCGATATCGGCGGCAAGTCGACCCAGCAACTGGCCATTGGCCTGCCGGCCA TCACCGGCGACGTGACCGTTGGCGCCATCAAGGTGGGCGACACCAGCGCCGCCAGCATCGGCTCGCTGACCGTCTCCGGGCTGAACATGGCCGGTTCCAC CATCAAGGTCTGGGGTCACTGATCCAGGAACCGAGTCGAGACGCGAAGACCTCGCCGAGGCATCGGCGGGGTCTTTCTCCGAAAGAGGTACGACGGGGCG
|
|
| DNA Sequence for Gene |
>NR96_RS30620
ATGTTCGAGATTTTGCTGGGAAGTCTGATCGGGCTGTTCGGGTTCACCCAGACGGTCGATACCAAGCCGCAACCGCAGGGCACGGTCAACCTCAGCCAGC CTCTGACCCCCAATGGACCCTACCGCGAATCGGTGCAGCTGGAGCCGATGAGCCAGTTGCAGTTCCGCAACGTCATCCGCCAGGCCTATGACTACAGCTG CGGCTCGGCGGCGCTTACCACGCTGCTGGACTACTACCTCGGGCGCAACCTCGAGGAACGCCAGGTCATGGAAGGGCTGCTGCGCTATGGCGAGGCCGAT AAGATCGTGCAGCGCCGCGGTTTCTCGCTGCTCGACATGAAGCGCTACGCCGCTGCGCTGGGCTACAAGAGCGGTGGTTTTCGCGCCGAGTTCAGCGACC TGGACGCTCTCGAGCATCCGGCGCTGGTCCCCATCCACTATGCCGGCTTCAAGCATTTCGTGGTGGTGCGCGATGTCTACAACGATCACGTCTTCGTCGC CGATCCGGCCTTGGGCAACATCAGCTTCACCCGGACGCGCTTCGAGGAAATCTGGGACCAGAACGTCCTGTTCGTGATCTTCCCGAGTGGGCAGGAGCCC CGCAACGCGCTGGCGCTGAACGATCGCGACATGCGCCTGGTGGACGACCGCACCGTCAGCCTGCTGGCGTTCCGCGAGTTTCCGCAGATCAACAAGATCA CTGAAAACCAGGTCCGTGAGCTGGGCACTGGTGGCGACGTCATACACCTGCGCACCAAGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CAGATACCCAAAAACAAGAACAATCTCTGGGGATAGCGCCATGAGAATCAGGGGGTACACATGCGCGGCGGCGCTGATGCTGTCTATCAGCGGTTTGTCC GTTGCCGAGGAAGCCTCGGTCGACCAGGCCCGTGACGCGCTGGCCAAGAAGAATGACGATGCCGACAGCGCCAAGGCGCTGGAGGAGGTCTTCCAGGCCG CCGAGAAGAGCTACACCTTGCTGAAGAAGGGCGAGCGGACCCTGACCTACGGTTTCGACTACGCGCTGGTGCGCGACCAGCGGCTGACCCTGGTGCCGCT GACCAAGACCAGTGGCGGCACGCAGATCTACGGCCTCGCCGGCCGGCAGAGCCAGTCCCAGCACACCTTCACCAACTCCTTCACCTTCGACTACGGGATC TGGGACAACCTCACCTTCAGTTTCCGCCTGCCGCTGGTAGCCAAGTACGACACCGAGATGGATACCCACGCCTACAGCCTCGGCGACGTTTCCGCGACCT
|
|
| Amino Acid Sequence |
>peptidase C39
MFEILLGSLIGLFGFTQTVDTKPQPQGTVNLSQPLTPNGPYRESVQLEPMSQLQFRNVIRQAYDYSCGSAALTTLLDYYLGRNLEERQVMEGLLRYGEAD KIVQRRGFSLLDMKRYAAALGYKSGGFRAEFSDLDALEHPALVPIHYAGFKHFVVVRDVYNDHVFVADPALGNISFTRTRFEEIWDQNVLFVIFPSGQEP RNALALNDRDMRLVDDRTVSLLAFREFPQINKITENQVRELGTGGDVIHLRTK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|