Pseudomonas aeruginosa AZPAE14880, NR96_RS25330
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14880 AZPAE14880_contig_29, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGACCACCACCAGCCAGGCCGGGAACAGGATCACCCGCCAGTCGCGGGCCTGTTCGTAGCGCATCTGGCCGGCGACGAAGAAGCTGTGGTGGTCGCCG GTATGGCGCTTGTAGAACATCCGCCCCAGCGGGTGCTTGTGGTGGCCGAGGGACTTGTGGATGCGGTACTCGCCCCAGTTGAAGAACACCAGCGCGGCCG GCACCGTCAGCCATTCCAGCAGGCTCGGCTGCTCGAGTCGGGAGAGGAAGAAGACGATCCAGGCGCCGCCGTAGGCGAGGACGAAGCCGGCGTGCAGCCA GGGGTTGTAGCCGGGCCGGATGGCCGCGCGGTACTGCTGGCGAAAGGGTTGGGGATCGAAGGACATGGTCGGCATCTCGCGTGTGATTGTTATTGGCTGG GCCGCGAACCGGGCCGATCCGCCGGGGCGGAAGGGCTTGCATTCGAGTGTAGCGATGCCAGTCTTATCAGGGTAATGGATAAATAGAATGAGGATTATTC
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| DNA Sequence for Gene |
>NR96_RS25330
ATGAAGCTGAACTTGCAGCAGCTCGACCTCAACCTGCTTCTGGTCTTCGATGCCCTGATGCGCGAACGCAACCTGTCGCGCGCGGCGATCCGCCTGCATC GCAGCCAGCCGGCGGTGAGCAACGCCCTCGCCCGCCTGCGCGAGCAGCTCGACCAGCCGCTGTTCCGGCGCACCGCCAAGGGCCTGGAACCCACCGCCGC CGCCCTCGCCCTGTACGTGCCGGTGCGCCAGGCCCTGCATCTGCTGCAGGCCGGCCTTGGCTCCCAGGAAACCTTCGATCCGCACACTGCGCGGACCTTT CGCCTGACGATGAACGACTATGCCCAGTTGCGCCTGCTGCCGGGCCTGGTGACCCGCCTGAAGACCCTGGCCCCGCGGGTGACGCTGGAGGTACGTCCCG ACGAAGGCGCCTCGATCCCGGCGCAACTGGCCAGCGGCGAACTCGACCTGGCGATCGACTACCTGTACTTCGACGAGCCCGAGCTGGCCTACCGGCCGGT CGGCGAGGAACGCCTGGTGGTGATCGCCCGGCAGGGCCATCCGGCCTTCCGCGGCGGCCTCGACCGCGCGGCCTACGAGGCCGCGCAGCACGTCTCGATC CTGCCGCGGGTCGGGCGCGGCAGTCCGCTGGAGATCGTCCTCGGCTCGGCCAGGGTACAGCGCCAGGTGCAATTGCTGGTGCCTCACTACCTGACCATCC CGGCCATCGTCGCCAGCACCGAGCTGCTCGGCACCGTGCCACGCCGCCTGGCCGAGCGCTTCGCCGGCAGCCATGGTTTGCAACTGGCGGACGTCCCCTT CGAGATGGCCCCGGTGCAGGTCAACCTGATCTGGCATCGCCAGCAGGAAGCGACGCCCGGCCTGCAATGGCTGCGCGAGCAGATCGTGCAGATCGAACAG GGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCATAGGTTGCGCGCGAGGATCAGTCTTCCGTCACTTTCGATCATTGAGCGAGGCCTTTCCCACAACCTATGGTGAGGCTCCGCCCCGCAACCGGCCCC AGGCCGCCCCGGGGATACAGTCCAGCACCCGCCAGAGGAGCCACCGTATGACCAGCCTGCCGCTCGAAGCCAACGCCGCCGCCACCCTCGCCGAATGGCA CGGGCTGATCGCCCGCCGCGACCTCTCCGGGTTGCCGCGCCTGCTGCACCCCGATGCCGTGTTCCGCTCGCCGATGGCGCACAAGCCGTATGCCGGCGCA CCGGTGGTCTCGATGATCCTGAATACCGTGCTCACGGTCTTCGAGGATTTCGCCTATCACCGCCAGTTGGCCAGCGCCGACGGCCGCAGCGTGGTGCTGG AATTCAGCGCACGGGTCGGCGAACGCGAACTGAAAGGCATCGACATGATCCGCTTCGACGACGACGGCCGGATCGTCGACTTCGAAGTGATGGTCCGTCC
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MKLNLQQLDLNLLLVFDALMRERNLSRAAIRLHRSQPAVSNALARLREQLDQPLFRRTAKGLEPTAAALALYVPVRQALHLLQAGLGSQETFDPHTARTF RLTMNDYAQLRLLPGLVTRLKTLAPRVTLEVRPDEGASIPAQLASGELDLAIDYLYFDEPELAYRPVGEERLVVIARQGHPAFRGGLDRAAYEAAQHVSI LPRVGRGSPLEIVLGSARVQRQVQLLVPHYLTIPAIVASTELLGTVPRRLAERFAGSHGLQLADVPFEMAPVQVNLIWHRQQEATPGLQWLREQIVQIEQ G
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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