Strain | Pseudomonas aeruginosa strain AZPAE14880 AZPAE14880_contig_29, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCTGCGCGGCCTGGCTTCCGAGGGCGCCGAGCGCCTCGGCCCGCTGGCGCGCTTCGCCGATTACCTCTGGCACCTGGCGCTGCCGGTGGGTTCGCTGGTG GTCGGCGGTTTCGCCAGCCTGACCCTGCTGACCAAGAACAGCTTCCTCGACGAGATATCCAGGCAGTACGTCGCCACCGCTCGCGCCAAAGGGCTCAGCG AGCGCCGGGTGCTCTACGGCCATGTGTTCCGCAACGCCATGTTGCTGGTGGTGGCCGGGCTGCCGGCGGCGCTGGTCTCGGTGTTCTTCACCGGGTCGCT GCTGATCGAGGTGCTGTTCTCCCTCGACGGCCTCGGCCTGATGGGCTACGAAGCGGCGCTCGGCCGCGACTACCCGGTGGTGTTCGGCAGCCTGTTCATC TTCACCCTGCTCGGGTTGCTGGTGAAGCTGGCCGGCGACCTGGCCTACAGCCTGGTCGACCCGCGCATCGACTTCGCCGCGAGGAAACAGTGAGATGGCC
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DNA Sequence for Gene |
>NR96_RS25025
ATCGTCCTTTCCCCGCTGCACCGCCGCCGCCTCGCCGCGTTCCGCGCCAACCGCCGCGGGCGTCTGGCGCTGCGGCTGTTCCTCGCGCTGTTCGTCACCT GCCTGTTCGCCGAGCTGATCGCCAACGACCGCCCGCTGCTGCTGGAATACCGTGGCCAGTGGTTCCTGCCGGTGCTGCGGGACTATCCGGAAACCGCCTT CGGCGGCGAGCTGCCGTTCCCGCCGGACTACCGCGGTCGCTTCATGAGCGAACGCATCGCCCGCGACGGCTGGGCGCTGTGGCCGCCGATCCGCTTCGAC GCGCGCAGCATCAACTACGCGCGCCCGGCGCCGGCGCCGCCCTCGGCGGAGAACTGGCTGGGTACCGACGACCAGGGCCGCGATGTGCTCGCGCGGGTGA TCTACGGCCTGCGCCTGTCGATTCTCTTCGCCCTCGGCCTGACCCTGGCCTCGTCGTTGCTGGGAATCTGCGCAGGCGCGGTGCAGGGCTACTACGGCGG CTGGATCGACCTGTTCGGCCAGCGCTTCATCGAGGTCTGGTCGGGTCTGCCGATGCTTTACCTGCTGATCATCCTCGCCAGCCTGGTGCAGCCCGGGGTC GGCTGGCTGCTGGCGATCATGCTGCTGTTCTCCTGGACCAGCCTGGTCGACGTGGTTCGCGCCGAGTTCCTGCGCGGTCGTCACCTGGAGTACGTCAAGG CGGCGCGGACCCTCGGCCTCGGCGACGCCGGGGTGATGTTCCGGCACATCCTGCCCAACGCCATGGTCGCGACCCTGACCTTCCTGCCGTTCCTGCTCTG TGGCGCGGTGACCACCCTGACCGCCCTGGACTTCCTCGGTTTCGGCCTGCCGCCCGGCTCGCCGAGCCTTGGCGAACTGGTCGGGCAGGGCCGTGACAAC CTCCAGGCGCCCTGGCTCGGGCTGACCGTGTTCGTGGTCCTGGCGACCTTGCTCAGCCTGCTGGTGTTCATCGGCGAAGCGGTGCGCGACGCCTTCGATC CGAGGACATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GATGAACCGGGAACTGTTGCGAGTGGAAAACCTGAGCGTCGCCTATGGCGATACGCAGGTCGTGAAGGGGATCGACTTCAGCCTGCGCGCCGGCGAGACC CTGGCCCTGGTCGGCGAGTCCGGCTCCGGCAAGTCGCAGACCGCCCACGCCCTGCTGCGCCTGCTGCCGGGCGCGGCGCGCCTGGGCGGCAGCGTGCGCC TGGACGGCGAGGAACTGCTCGCCCTGTCGCCGCAGGCATTGTTGGCGATTCGTGGGCAGCGCATCGGCATGGTGTTCCAGGAGCCGATGACCTCGCTCAA TCCATTGCAGCGCATCGGCCGCCAGGTCGGCGAGGGCCTGCGCCTGCATCGCCGCCTGCGTGGCGCCGCGCTGCGCGGGCGGGTACTGGAACTGCTAGAA CTGGCCGGCCTCGAGCAGCCGCGACGCCTGGTCGAGGCCTATCCGCACCAGCTCTCCGGCGGCCAGCGACAGCGAGTGATGCTGGCCATGGCGCTGGCTT
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Amino Acid Sequence |
>ABC transporter permease
MVLSPLHRRRLAAFRANRRGRLALRLFLALFVTCLFAELIANDRPLLLEYRGQWFLPVLRDYPETAFGGELPFPPDYRGRFMSERIARDGWALWPPIRFD ARSINYARPAPAPPSAENWLGTDDQGRDVLARVIYGLRLSILFALGLTLASSLLGICAGAVQGYYGGWIDLFGQRFIEVWSGLPMLYLLIILASLVQPGV GWLLAIMLLFSWTSLVDVVRAEFLRGRHLEYVKAARTLGLGDAGVMFRHILPNAMVATLTFLPFLLCGAVTTLTALDFLGFGLPPGSPSLGELVGQGRDN LQAPWLGLTVFVVLATLLSLLVFIGEAVRDAFDPRT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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