Strain | Pseudomonas aeruginosa strain AZPAE14880 AZPAE14880_contig_17, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGTCATCGGCTGCATCATCGCCACCCGCCTGATCAACCGCATCGGCCGGCGCTGCATGCTGCTGCACAGCTTCCTCTGGTCCGGCCTGGCGCTGCTCGGG CTGGGCGTCTTCCACGCCGGCTCGGAGGCGACCATCCTCGGCCTGTTCGGTGCCTACGCGCTGTTCATCGGCGGCGCCCAGGTGCTGCAACTGGTCTACC CGAACGAACTGTTCCCCACCGAGATCCGCGCCTTCGCGGTCGGCGTCGGCACCTCGTTATCGCGCGTCGGCGCCGCGGTGGGCACCTACCTGGTGCCGCT TTCCCTGGAAACCCTGGGTACCGCCCAGACCATGTACGCCGCCGCGCTGGTGACCCTGCTCGGGCTGCTCGTGACCTGGGCCCTGGCGCCGGAAACCCGT TCGCTGAACCTGCAGCAGGCGGCTTCGCTCACCTGAACCACCCGCCGCGGCAGCGTCCGCCGGGTGCGCCGCGGCCCAGCATCCCACAGGAGGAACCCCC
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DNA Sequence for Gene |
>NR96_RS19135
GTGAAATTCGAAGGTATCTATACCCCCGCCATCACCCCGCTGAGCGCCGACGGCAGCATCGACACCCAGGCCTTCACCGAGGTCCTGGAGTTTCTCGTCG AGTCGAAGGTGCACGGCATCGTGATCGGCGGCTCCACCGGCGAGTACTACGCGCACACCGCCGAGGAACGCCTGGCCCTCGCCGCCCACGCCAGCGAAGT CATCGCCGGGCGCCTGCCGCTGGTGGTGGGAACCGGCGCGATCCGCACCGAGGACTCGCTGGCCTACGCCGAAGCCGCCCGCGCCATCGGCGCCGACGCC ATCCTGGTCGGCTCGCCGCCCTACGCGCTGCCGACCTCGCGGGAGATCGCCGAGCACGTGCTGGCGGTGGATCGCGCCGCCGGCCTGCCGATCATGCTCT ACAACTATCCGGCGCGGATGGGCGTGGAGATGGACAAGGCGTTCTTCGCCGCCGTCGCCGGCTGCCGCAACATCGTCGCGATCAAGGAAAGCTCCGGCTC CACCGCGCAATTGCACCGCCTGGCCTGCCGCCACCCGCGGATCGCCTTGTCCTGCGGCTGGGACGACCAGGCCCTGGAGTTCTTCGCCTGGGGCGCGCGC AGTTGGGTCTGCGCCGGCTCCAACTTCATCCCTGGCGAACACCTCGCCCTGTACCAGGCCTGCGTGGTCGAGAACGACTTCGCCAAGGGCCGGCGCATCA TGGCGGCGATGATGCCGCTGATGGACTTTCTCGAAAGCGGTCACTTCGTCCAGTCGATCAAGCACGGCTGCGAACTGGCCGGCCTGCGCGCCGGCGGCGT ACGTGCGCCGCTGAAGGCGCTGGACGAGGCCGGCAAGGCGGCACTGGCGGAGATCGTCGCCAGGCTCAAGGGCGAGGTCGCGCGGATCGTCGAGAGTGGC CGCCATGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCTGCTGAGCCGGGAGGAATACGCGGCCATCGCCGCGACGCTGGACCTTCCCCAGCGCGCCTTCATCGACGGAGGGTTCCGCGATGCCTGCGGCGGCCGC ACCTTCGCCTCGACCAACCCGGCCACCGGCGAGCTGCTGGCGCAGGTCGCCGCCTGCGACGCGGAGGACGTCGGGCACGCCGTGGCCAGCGCGCGGCGGG CGTTCGAGGACGGCCGCTGGCGCTCGCGCACGCCCGCCGAGCGCAAGGCGGCGCTGCTGCGCCTGGCCGAGCTGCTGGAAGAGCACCTGCTGGAACTGGC GGTGATGGAGAGCCTCGACAGCGGCAAGCCGATCCGCGAATGCCAGCACACCGACCTGCCGGAAACCATCAATACCCTGCGCTGGCATGCCGAACTGATC GACAAGATCTACGACAGCACCGCCCCGGTCGGTTCAGCGGCGCTGGCCATGGTGGTGCGCGAGCCGATCGGCGTGGTCGGCCTGGTGCTGCCGTGGAACT
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Amino Acid Sequence |
>dihydrodipicolinate synthetase
MKFEGIYTPAITPLSADGSIDTQAFTEVLEFLVESKVHGIVIGGSTGEYYAHTAEERLALAAHASEVIAGRLPLVVGTGAIRTEDSLAYAEAARAIGADA ILVGSPPYALPTSREIAEHVLAVDRAAGLPIMLYNYPARMGVEMDKAFFAAVAGCRNIVAIKESSGSTAQLHRLACRHPRIALSCGWDDQALEFFAWGAR SWVCAGSNFIPGEHLALYQACVVENDFAKGRRIMAAMMPLMDFLESGHFVQSIKHGCELAGLRAGGVRAPLKALDEAGKAALAEIVARLKGEVARIVESG RHD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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