Pseudomonas aeruginosa AZPAE14880, NR96_RS18410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14880 AZPAE14880_contig_17, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCCTGCGCGGAATCGAGGACATCGTCGCGATCGACGTCAGTCCCGAGCGCCTCGCCCTGGCCGGGGAGTTCGGCGCCAGCCGGGCGCTCGACGCCCGCG ACGGCGACACGGCGGCGCGCCTGCGCGAGGGCGGCGCGCTCGACTGCGCCTTCGAGGCCGCCGGCAGCCAGGCCAGCCTCGACGCCGCCCTGGCCAGCCT GCGCAAGGGTGGCGAGCTGGTGCTGGTGAGCCTGATGGGCGAGGTCCGGCTGGACGCCTTCGACCTGGTCAACCGCGAACTGCGCCTGCTCGGCAGCGTC GGCTACCGCGACGCCTACCCGGAGCTGATCGCCCTGCTCGCCGACGGCCGCCTCGACCTGGCCCGCGCAGTGACCCGCAGCGTGCCCCTGGAGCAGGCCG TCGAGCACGGTTTCGAGGCCCTGCTGCGCGACAAGTCGCAGGTCAAGGTGCTGGTCAATCCCAACCCGGCCCTGGCCGACGCCTGAAGGAACGATCGCCG
DNA Sequence for Gene
>NR96_RS18410
ATGGTTTTCCAACACGATATCTACGCCGGCCAGCAGGTGCTGGTCACTGGCGGCAGCTCCGGCATCGGCGCGGCCATCGCCATGCAGTTCGCCGAACTCG GCGCCGAAGTCGTCGCCCTCGGCCTGGACGCCGACGGCGTGCACGCACCGCGTCATCCGCGGATTCGCCGGGAAGAACTGGACATCACCGACAGCCAGCG CCTGCAACGGCTGTTCGAAGCGCTGCCGCGCCTGGATGTGCTGGTGAACAACGCCGGCATCAGCCGCGACCGCGAGGAATACGACCTGGCTACCTTCGAA CGGGTGCTGCGCCTCAACCTGAGCGCCGCCATGCTCGCCAGCCAACTGGCCCGGCCGCTGCTGGCGCAGCGCGGCGGCAGCATCCTCAACATCGCCTCGA TGTACAGCACCTTCGGTTCCGCCGACCGCCCGGCCTACAGCGCCAGCAAGGGCGCCATCGTCCAGCTCACCCGTTCCCTGGCCTGCGAGTATGCCGCCGA GCGCATCCGGGTCAACGCCATCGCCCCCGGCTGGATCGACACGCCGCTGGGCGCCGGGCTCAAGGCCGACGTCGAGGCCACCCGCCGGATCATGCAGCGC ACGCCGCTGGCGCGCTGGGGCGAGGCGCCCGAGGTGGCTAGCGCCGCGGCCTTCCTCTGCGGTCCCGGCGCCAGCTTCGTCACCGGCGCCGTGCTGGCGG TGGACGGCGGCTATCTCTGCGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGCCTTCGCTCCGGATGCACCTGTCCGCTTGGGGCGGACAGCGATTCGCACGACAGAACAACAACAAGACGAGTGCCTTGCCATGAAAACCCTCCGCA CCTTGCCGGCGCTGCTCTGCGCCGGTTTCCTCGGTCTCTCCGCGCAGGCCGCCGAAGACAGCCGCAGCGGCCCGCTGGCCGGGTTCGGCGAACGACTCCA GCGCCACGGCGTGAAGACCCACGCGCAGTTCTGGAGCCTGTCGCTGAAGAACCTCGACACCGGCCCGCGCCAGCACAGCTTCGGCAACAGCGGCGACCTG TTCCTCGGCGCCGACCTCGACCTCGCCACCCTCGCCGGCCTGGACGGCGCCTCGCTGCACATCGAGGAAACCCTGTTCATCCTCGACCGCGGCACCGGTC AGCCCACCGGGCCGAGCTGGCAGGGCGCGGTGGGCAGCTACTTCGGCGGCGCGCCGCTGCACAACGACATCGGCGCCAACCAGCTGAGCCTGCTCACCTG
Amino Acid Sequence
>2-deoxy-D-gluconate 3-dehydrogenase
MVFQHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGISRDREEYDLATFE RVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQR TPLARWGEAPEVASAAAFLCGPGASFVTGAVLAVDGGYLCA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site