Strain | Pseudomonas aeruginosa strain AZPAE14880 AZPAE14880_contig_14, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACCGAATTCGTCGCAGCCGCCATAGGTCAGTTCGTTGGCTTCGATCGCCTGATCGATGAAGCGCAACATGAAAGCGTTCACCGCATCGGCATCCACGCCT TCCTTGTAGTGGAAGTTCAATTCGAAACCCAGCTCCTGGAATTCATCGACGCACAATTTCTTGCGCAGGCGGCGGGAACGATTCGTAGCCATGGCGGCAT CTCCTGGATTGACGCTCCATTGGCGGAGCCTCGCATTACAGACAGTAGCCGACGCCGCTGGAGCCGCGGGCGAACCCCGGCAAGCCGCGCGACGCGGCCG GATTGCCGGCGCACTCTACCAGTTCCGACCATTCGGCGATATGACGGCGAACTCCGCGAAACTCCAGCGCATCGTTATCCGCCTTGCGGCATAATGAGCA AGACGGCCTCTTCGCGTGATGTCCGTCTCTTTTTTCAGGTTCGCTTCGTTTTTCATCTTCATTTCATTTTCTACCCTCCGTCTTCAAGGGTTCTTCATTA
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DNA Sequence for Gene |
>NR96_RS15890
ATGTTCAAGTCGCTGCGTACTCTTGCCTTCGCCACGCTCCTGCCTTTCGCCCTTCCCACCCTCGCCCAGGTCAACGCCACCCTGCCGGCCAACGTGCAGA AAGCCCTGCAGACCAACAAGCTGACCGGCAACGATCTGTCGCTGGTGCTGATTCCTCTCGACGGCCCGGGCAACCCCACCTACTACAACGCCGACGTATC GGTGAACCCGGCCTCGACCATGAAGCTGTTCACCACCTATGCCGCCCTGGAAATGCTCGGCCCGACCTACCAGTGGAAGACCGAGTTCTACACCGACGGC CAGCTCAAGAACGGAGTGCTCAACGGCAACCTCTACCTCAAGGGCGGCGGCGATCCGAAACTGAACATGGAGAAGCTCTGGCTGCTGATGCGCGACCTGC GCGCCAATGGCGTGACCAAGGTCACAGGTGACCTGGTACTCGACCGCAGCTACTTCAACATCCCGCAGTTGCCGGTATTCAACGACGACGGCGGCGACGA CACCAAGCCGTTCCTGGTCGGTCCGGACTCGCTGCTGGTCAACCTGAAGAGCGTGCGCATGGTGGTGCGCACCGACGGCAACAAGGTCAACGTGCAGATG GACCCGCCGCTGGCCAACGTACGCATCGACAACCAGGTGAAGATGACCGCGCCGGCCACCTGCCCGGCCTGGCCGAAGCTGCGCTTCAGCCCGGTGACCC AGTTCGACGGCACCACCCTGCTGGCCACCGGACAGATTCCCCAGGGCTGTAGCGCGCAGACCTACATGTCGCTGCTCGACCACCCCGGCTACACCGCCGG CGCGGTGCGCGGCATCTGGCAGGAACTGGGCGGCAGCATCCTCGGCAAGGACCGCCAGGGCAGCGTACCGCGCAACGCCACGCTGATCGCCAAGGCCTTC TCGCCAGACCTGGTCGAGATCATCCGCGACATCAACAAATACAGTAACAACACCATGGCCCGGCAGTTGTTCCTCTCCATCGGCGCGCAGTTCCGCAACA GTGCCGACGGCGACGACGCCCAGGCCGCGCAGCGGGTGGTGCGGCAGTGGCTGGCGCGCAAGGGCATCACCGCGCCGCGCCTGGTGATGGAGAACGGCTC GGGACTGTCGCGCCAGGAACGGGTTAGCGCCCGTGAGATGGCGGCGATGCTGCAAGCCGCCTGGCACAGCCCCTATGCAGCGGAGTACATCTCCTCGCTG CCGCTGGCCGGCCTCGACGGCACCATGCGCAAACGCCTGCGGCGCACCGCACTGGTCGGCGAGGCGCACGTGAAGACCGGCACCCTCAACACCGTGCGCG CCCTCGCCGGCTTCAGCCGCGACGCCAGCGGCCACAACTGGGTGGTGGTGGCGATCCTCAACAGCCCGCGGCCGTGGGGCGCTTCGGCGATCCTCGACCA GGTACTGCTGAGCCTGCACGCGCGGAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGCAGTACGAAAAAAAGGCCGCCAGCGGTTGCCCGCCGGCGGCCTTTTGCATGAATGCCGCTCGCCTCAGCGAACGGTGATTCTCCAGGCCCGATGGA TCTTCGGATTACGCGCGAAATCCGGATCGAGGGTTTCGCCAGTGATCTCTTCGACCGCATAGCGGGCCTGCACGCTCTCGTCCAGTTCGAACTTGCGGAA GTTGTTGGAGAAATACAGCACCCCGCCCGGCGCCAGCCGCGCCATGGCCAGGTCGAGCAGTTCGACGTGGTCGCGCTGCACGTCGAATACGCCTTCCATG CGCTTGGAGTTGGAGAAGGTCGGCGGGTCGATGAAGATCAGTTCGTACTGGCCATCGTCTTCCCGCAACCACTCCATCACGTCGCCGTGCACCAGGCGCT GCTTGTCGGAAAAGCCGTTGAGCGACAGGTTGCGGCGCGCCCAGTCCAGGTAGGTCTTCGACAGGTCGACGCTGGTGGTGCTGCGCGCGCCGCCCCTGGC
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Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MFKSLRTLAFATLLPFALPTLAQVNATLPANVQKALQTNKLTGNDLSLVLIPLDGPGNPTYYNADVSVNPASTMKLFTTYAALEMLGPTYQWKTEFYTDG QLKNGVLNGNLYLKGGGDPKLNMEKLWLLMRDLRANGVTKVTGDLVLDRSYFNIPQLPVFNDDGGDDTKPFLVGPDSLLVNLKSVRMVVRTDGNKVNVQM DPPLANVRIDNQVKMTAPATCPAWPKLRFSPVTQFDGTTLLATGQIPQGCSAQTYMSLLDHPGYTAGAVRGIWQELGGSILGKDRQGSVPRNATLIAKAF SPDLVEIIRDINKYSNNTMARQLFLSIGAQFRNSADGDDAQAAQRVVRQWLARKGITAPRLVMENGSGLSRQERVSAREMAAMLQAAWHSPYAAEYISSL PLAGLDGTMRKRLRRTALVGEAHVKTGTLNTVRALAGFSRDASGHNWVVVAILNSPRPWGASAILDQVLLSLHARK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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