Strain | Pseudomonas aeruginosa 2192 supercont1.1 genomic scaffold, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCAACCCCTACCTGCTGCTGGCCTCGGTGCTTGCCGGGGTGCACCACGGGCTGACCAACAAGGTCGAGCCGGGTGCCCCGATCGAAGGCAACTCCTACG AGCAGTTGGAGCCGAGCCTGCCGAACAACCTGCGCGACGCCCTGCGCGAACTGGACGACAGCGAGATCCTGGCGAAGTACATCGATCCGAAGTACATCGA CATCTTCGTCGCCTGCAAGAAAGCGAGCTGGAGGAGTTCGAGTACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCACACCGTGTGAGCATNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCCA CCCTTGCTGAAGGTAGACGAGCGACAAGCCTGCGAGTTTCCGCCCGTCCGCCTTCCTTTGCTGTGCATTAGAAAAAGAAGAAATCGAGGCAAGCATACCC
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DNA Sequence for Gene |
>PA2G_01126
ATGTCGAATCCTCCCCCCACTGCAGAACGAACCCAGCTTCGCAAGTCCCTCAAGCTGTGGCAGATCGTCATGATCGGGTTGGCCTACCTGACCCCGATGA CCGTCTTCGACACCTTCGGCATCGTATCCGGGATTTCCCAGGGACACGTGCCCACCGCCTACCTGCTGGCCCTCGCCGGCGTGCTGTTCACCGCGATCAG CTACGGCAAGCTGGTCCGCCAGTTCCCCACCGCAGGCTCGGCCTATACCTACGCGCAACGAGCGATCAATCCCCATGTCGGCTTCATGGTCGGCTGGTCG TCGCTGCTGGACTACCTGTTCCTGCCGATGATCAACGCACTGCTGGCGAAGATCTACCTGACCGCATTGTTCCCCGAGGTCGCCCCGTGGATCTGGGTAG TGATGTTCGTGCTGATCATGACCCTCATCAACATCAAGAGCGTGAACCTGGTCGCCAATTTCAACACCGTCTTCGTGCTGGTCCAGCTGGCGATCATCGT GGTCTTCATCGGCCTGGTGATTCACGGCCTGAACAACGGGGAGGGGACCGCCACGGTGCTCAGTACCCAGCCGTTCTTCTCCGAGCACGCGCATCTCTCG GCGATGGTGGCGGGGGCGACGATCCTCTGCTTTTCCTTCCTCGGTTTCGACGCGGTGACTACGCTGTCCGAGGAAACCCGCGACGCCGGCAGGGTGATCC CGCGGGCGATCTTCCTCACCGCGCTGTACGGCGGGGTGATCTTCATCACCGTGTCGTATTTCCTGCAGTCCTATTTCCCGACCAACGTACGCTTCAAGGA ACCCGACGCGGCGCTGCCGGAAATCGCCCTGTACGTCGGCGGCAAGCTGTTCCAGTCGATCTTCCTCTGCGCCACCTTCATCAATACCCTGGCGTCGGGC CTGGCCTCCCAGGCCAGCGTGTCGCGCCTGCTGTACGTGATGGGGCGGGACAACGTGCTGCCGGAGCGGATCTTCGGCTTCGTCCATCCGAAATGGCGTA CGCCGTCGATCAACGTGCTCATCGTGGGCATGGTGGCGCTCTCGGCGATCTCCTTCGACCTGGTGACGGCGACCGCGCTGATCAATTTCGGCGCCCTGGT GGCCTTCACCTTCGTCAATCTCTCGGTGATCGTGCATTTCTATGTGCGCGGCGGGCGCAACCGCAGCCTCAAGGAGCATTTCCACTACCTGGTCCTGCCA TTGCTCGGCGCGGCCATCGTCGCGGTGCTCTGGCTCAACCTGGAAAGCACCTCGCTGGTGATGGGGCTGATCTGGGCCGGACTGGGCTTCGGCTACCTGT TCTACCTGACTCGCAGCTTCAGCCGTCCGCCGCCGCGCTTCCAGGAGAGCGAGCTGAGCCCGACCCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGAGCGGTGAATGGATTCAGCGGAAATGTGAAGGAAAAAGATTGGTAATCTTCACGAAATTTTCACGGTGACGGGTCAATCATGGACCCATGGCTAAC GGACTAGCCCCCCATCTGAAGCCCGCCTCATGGCGGGCTTTGGCTATCTGCAGACAGCGAATTTCGCGTTTTCCCTCCTTTTCACAGGGGTTTCCGGCCT CCCGGCTGGCAATGCGCCTGCGACGACATGTCCGAATCCAGACAGAATTGGACGCCCCCAAAAAGCGCAGACACGGCTAGAATCCACGCCGTCCCGATCC GGTTCGATGGCCGTGGCGGGGGAGCCCGGTATCCGCTGGTCGGTGTTTCCTGTGGTGCTGTGCGTCCTTCCCTAGACTACCCGGCTCGCTCGAACCATCC CTTCGCGGGGGCGGAACGGCACAGGGTCGTTCGGCATGGAAGCTGCCTGGGCCGGCCTTCGACACACCTATAAGAGTAGAAATCTGCATGACATACCCTG
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Amino Acid Sequence |
>putative amino acid permease
MSNPPPTAERTQLRKSLKLWQIVMIGLAYLTPMTVFDTFGIVSGISQGHVPTAYLLALAGVLFTAISYGKLVRQFPTAGSAYTYAQRAINPHVGFMVGWS SLLDYLFLPMINALLAKIYLTALFPEVAPWIWVVMFVLIMTLINIKSVNLVANFNTVFVLVQLAIIVVFIGLVIHGLNNGEGTATVLSTQPFFSEHAHLS AMVAGATILCFSFLGFDAVTTLSEETRDAGRVIPRAIFLTALYGGVIFITVSYFLQSYFPTNVRFKEPDAALPEIALYVGGKLFQSIFLCATFINTLASG LASQASVSRLLYVMGRDNVLPERIFGFVHPKWRTPSINVLIVGMVALSAISFDLVTATALINFGALVAFTFVNLSVIVHFYVRGGRNRSLKEHFHYLVLP LLGAAIVAVLWLNLESTSLVMGLIWAGLGFGYLFYLTRSFSRPPPRFQESELSPTQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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