Strain | Pseudomonas aeruginosa strain AZPAE14882 AZPAE14882_contig_44, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACGGATGCCGACGATTCTTCCAGGCCCGCTCCAGCGGCCAGCGGATGGCGGCGATCAGCAGGTACAGGCCGAAACCGAGCAGCGCCACCAGGGCCAGGTC AGAGACCGCGCGCCAGGCGTTGTTGCCGACCTTGAACACGACATCCAGCGCGGTGATGGCGATGGCCGGGGCGTAGAGGTCGTTCTGCGGGTCCACCGGA GTCGGCGTGAACAGCAGGATGAAGACGATCAGCCGCAGGGGTTCGCGCAGCCAGCGCCACATCCAGCCGGTCATCAGCCAGAACACCAGCATCAGGCCGA GTCCGGCGATGGCGTAGGCGCCCCAGGCGATCAGATAGTCTTGTTCATTCATGCGGCGTGCGTGGCGATAGCGGTGATGGGGGGCTTATGATAGCCGCTT TTGCATGCCGACGCGCCTACCCACCGATGGCGGGCGCCGCGCCGCCAGTTTTATTCAGATTTCCCGGCCTCGCGCATGGCCGGATCGACGAGGATTCCCG
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DNA Sequence for Gene |
>NR98_RS26200
ATGCCCCATCCGCAGCCCCCCATCGCCCGCCGCGACGCCGGAAGCGACCCCTACGCCTGGCTGGAGGAGCGCGACGCCCCGGAGGTGCTCGACTACCTGA AGGCCGAGAACGCCTACCTGGATAGCGAACTGGCCGACCAGGCCGGGTTGCGCGAGACCCTGTTCGAGGAGATCAGGGGACGCATCCGCGAGACCGACCT GTCGTTGCCCAGTCCGTGGGGTCCGTGGCTGTACTACCAGCGCACCACCGCCGGCGACGAATACCCGCGCCACTACCGCTGCCCGCGTCCGGCGGACGGC AGCCTGGCGGTCGACGAAGGCGCCGAGCAACTGTTGCTCGATCCCAACCAGTTGGCCGACGGCGGCTTCCTCTCCCTCGGCGCCTTCAGCATCAGCCCCG ACCAGAGCCTGCTGGCCTACAGCCTGGACACCAGCGGCGACGAGATCTACCGCCTGTTCGTCAAGGACCTCGCCAGCGGCGCGGTGCAGGCCCTGCCCTT CGACGACTGCGACGGCAGCCTGACCTGGGCCAACGACAACCGCACGCTGTTCTTCGGCGAACTGGACGACACCCACCGCCCGCACAAGCTCTATCGCCAC CGCCTGGGCGAGGCCGGCGCCGAGCTGGTGTTCGAGGAAGGCGACGGGCGCTTCTTCCTGCACTGCTACCGCTCCAGCTCGGAACGCCAGCTGATCCTCC TGCTCAACAGCAAGACCACCAGCGAGGCCTGGGTGCTCGACGCCGACCAGCCGCAGGGAACGTTCCGTTGCCTGGCGCCGCGCGAGGAAGGCCACGAGTA CTACCCCGACCACGGTCGCCTCGACGGCCGGGGCCTGTGGCTGATCCGCAGCAACCAGGCGGGGATCAACTTCGCCCTCTACCAGGCCGAGGAGTCGCGG CCGACTCGCGAGCACTGGCAACTGCGCGTGGCCCACGACCCGCAGCGGACCCTGGAAGATGTCAGCCTGAACGCCGAGGCGGTGATCCTCGGCCTGCGCG ACGGCGGCCTGCCGGTGATCGAGGTGCAACCGCAGGGCCTGCCGGCCTACCGCGTGCAGTTGCCGGACGCCGCCTACAGCCTCTACGTGCAGGACAGCCT GGAATTCGACAGCCCCTGCGTGCGACTGCGCTACGAGGCCCTGAATCGTCCGGCGCAGGTACGCCAGCTGAATCTCGCCGATGGCACGCAGACCGTCCTC AAGCAGACCCCGGTGGAAGGCCCATTCGACGCCGACGCCTACGCCAGCCGGCGCATCTGGGCCAGCAGCGGCGACGGCACGCAGGTGCCGGTCAGCCTGG TGGCGCGCAAGGGAGTCCTCGACGGCATCGCCGCCGGGCGCCCCGCGCCGCTCTATCTCTATGGCTACGGCGCCTACGGGCATAGCCTCGATCCCTGGTT CTCCCACGCCCGCCTGAGCCTGCTCGAACGCGGCTTCGTCTTCGCCATCGCCCATGTCCGTGGCGGCGGCGAACTGGGCGAAGCCTGGTACCGGGCCGGC AAGCTGGAACACAAGCAGAACAGCTTCGACGACTTCATCGCCTGCGCCGAGCACCTGCTCGCCGAGGGCTACTGCCGTCCCGAGGGCCTCGCCATCAGCG GCGGCAGCGCCGGCGGGCTGTTGATCGGCGCGGTGCTCAACCAGCGCCCGCAACTGTTCGGCGCGGCCATCGCCGAGGTGCCGTTCGTCGACGTGCTGAA CAGCATGCTCAATCCGGACCTGCCGCTGACCGTCACCGAATACGATGAGTGGGGCAACCCGCAGGAGCCCGAGGTGCATGCGCGGATCGCCGCCTACGCG CCCTACGAGAACGTCAGGGCCCAGGACTACCCGCACCTGCTGGTGGTCGCCGGCTACAACGACAGCCGCGTGCAGTACTGGGAAGCCGCCAAGTGGGTGG CGAAACTGCGGGCGACCAGGACCGACGCCAACCTGCTGCTGCTCAAGACCGACCTCGGCGCCGGCCACGGCGGCATGAGCGGCCGCTACCAGGGGCTGAA GGACGTGGCGCTGGAATACGCCTTCCTGCTCAAGGTCCTCGGCCTGGTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCACCGCGGGGGCCGGCGACGCCGGCCTTCCGCCACGAAAAAGGGAACCTTCGTGAAACGACGCTTCTGGCCCGCCATGGGCCTGCTCGCCGCGATCATG CTGGCCGTCTACCTGGCGAATCCGTTCGGCACCGCCAGTCTCGACCCGCGCGCACGGCTCCTCGGCGTGGCGCTGTACAAGATCCCTTCGCGCTCGATGG AACCGACCTTGCAACAGGGCGACTTCATCCTCGCCAACGCCGCGCGCTACGCCTTCGCCGACCCGCAGGTCGGCGACCTGGTGGTGTTCCGCTTCCCGCC GCAGCGCAGCATCGCCTATGTGAAGCGCATCGCCGGGATACCCGGCGATCGCGTGCGGATCGATGGCGGCCGGCTCTACGTCAATGAGCGCCCGGTGACG GAGCCCTACCTGGCGCAACAGGCGCTGCGCCAGCCGGACTCCCTGCGCATGGCCCAGCGGACCGTCCCCGCCGGCCACTACTTCATGCTCGGCGACAACC
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Amino Acid Sequence |
>Protease II
MPHPQPPIARRDAGSDPYAWLEERDAPEVLDYLKAENAYLDSELADQAGLRETLFEEIRGRIRETDLSLPSPWGPWLYYQRTTAGDEYPRHYRCPRPADG SLAVDEGAEQLLLDPNQLADGGFLSLGAFSISPDQSLLAYSLDTSGDEIYRLFVKDLASGAVQALPFDDCDGSLTWANDNRTLFFGELDDTHRPHKLYRH RLGEAGAELVFEEGDGRFFLHCYRSSSERQLILLLNSKTTSEAWVLDADQPQGTFRCLAPREEGHEYYPDHGRLDGRGLWLIRSNQAGINFALYQAEESR PTREHWQLRVAHDPQRTLEDVSLNAEAVILGLRDGGLPVIEVQPQGLPAYRVQLPDAAYSLYVQDSLEFDSPCVRLRYEALNRPAQVRQLNLADGTQTVL KQTPVEGPFDADAYASRRIWASSGDGTQVPVSLVARKGVLDGIAAGRPAPLYLYGYGAYGHSLDPWFSHARLSLLERGFVFAIAHVRGGGELGEAWYRAG KLEHKQNSFDDFIACAEHLLAEGYCRPEGLAISGGSAGGLLIGAVLNQRPQLFGAAIAEVPFVDVLNSMLNPDLPLTVTEYDEWGNPQEPEVHARIAAYA PYENVRAQDYPHLLVVAGYNDSRVQYWEAAKWVAKLRATRTDANLLLLKTDLGAGHGGMSGRYQGLKDVALEYAFLLKVLGLV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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