Strain | Pseudomonas aeruginosa strain AZPAE14882 AZPAE14882_contig_4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGTCGGGAGCATTACATCTTTGTCAGCTTGCCGCCGTTGCGGACCGCGAAGGCTAAGATCGCCCAGCGCCACCGACGGGCATAAAAAACCCGCCGACCGG AAACCAGGGAACCGGTGGCGGGTGAAGACGGGATCGGAGCCCTCCGTCATCCCGTGTGGAGCCGGGGGTGGAAGAACTGGCGATCAGCAGTTTTCCTTGT CCTTCTTCGTCGCTTCGGCCTGCTTCGCCAGTTTCTCCTGGTGCGCGGCACGAGCCTTGGCGGCCTGGGCCTGCATGCGCTCGAAGACGATGTCGCCGCC GCTGTCGGCCATGGCCGGAACGGTCGGGGCGAGGACCAGCAGGAAAGCGAGGGTGGAGGCAGTGAAGGTACGCATGGGAAGTCTCCTCGAATGAGTTCCC CTGTAGTCTGCGCGGGGGCCACTGTCGCCCCCGTTACCCACTGATTACGATGCTGTCAGAAACAGGTCGGCATGGCCGGCAAATGTAACGAGGGATGAAC
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DNA Sequence for Gene |
>NR98_RS04005
ATGAAACTGCTGATCGTCGAAGACGAACCGCGCATCGGCCAGTACCTGCGCCAGGGGCTCGCCGAGGCAGGCTTCGCCGTCGACCTGAGCGACGATGGCA ACGAGGGCGAGCAACTGGCCCTGGGCGGCGACTACGACCTGCTGATCCTCGACGTCATGCTGCCCGGCCGTGACGGCTGGCAGATCCTGCGCAGCGTGCG CGACGCCGGGATGACCGTACCGGTGCTGTTCCTGACCGCCCGCGATGCCGTAGAGGACCGCGTGCGCGGCCTCGAACAAGGCGCCGACGATTACCTGGTG AAGCCGTTCGCCTTCGTCGAACTGCTCGCCCGGGTGCGCACCCTGCTGCGCCGGGGCAGCCAGCAGTTGCAGGAGACCACCCTGCAACTGGCCGACCTCG AACTCGATTTGCTGCGCCGCCGGGTGCAACGCCAGGGCAAGCGGATCGACCTCACCGCCAAGGAGTTCGCCCTGCTCGAACTGCTGCTGCGGCGCAGCGG CGAGGTGCTGCCCAAGTCGCTGATCGCCTCGCAGGTCTGGGACATGAACTTCGACAGCGATACCAACGTCATCGAGGTGGCCATCCGCCGCCTGCGCGCC AAGGTCGACGACGACTACCCGCAGCGCCTGATCCATACCGTGCGCGGCATGGGCTACGTTCTCGAAGAGCGCGACGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGCCGGGTTCGGCTCGCGGATGTCCCTCGGCGTCCGCCTGAGCCTGCTGTTCGCCGCCTGCACGGCGGCGGTCTCGCTGATCGCCGGATTGATCTTCAG CAGGGCCATCGACGAGCATTTCGTCGAGCTCGACCATATGGCGATGTCCGCCAAGCTCGCGGTGTTTCGCGATGAGCTGCGCGGCCTCGGCTCGGAACAA CAGATGCGCCGCCGCGAAGCGGAACTGCTGCGCGAACTGGCACGCCATCCCGACCTCGGCCTGCGCCTGAACGGCCCGGATGGCAGCCTCTGGTTCGAGC GCCTGCCGCAGCCTGCGCATCCCGGCCAGCCCGCCAACCGCGAACTCGGCGCCCCGCTGGAGCCCGGCAACGACGCTTCGCCGCAACTCACAGTGATCCT CGACATCAGTCATCACCAGCACTTCCTGCAACGCATGCGCCAGTTGATCTGGCTGACCATGAGCCTGTCGGCGCTGGCCACGGCGCTGCTCGGCGCCTGG
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Amino Acid Sequence |
>transcriptional regulator
MKLLIVEDEPRIGQYLRQGLAEAGFAVDLSDDGNEGEQLALGGDYDLLILDVMLPGRDGWQILRSVRDAGMTVPVLFLTARDAVEDRVRGLEQGADDYLV KPFAFVELLARVRTLLRRGSQQLQETTLQLADLELDLLRRRVQRQGKRIDLTAKEFALLELLLRRSGEVLPKSLIASQVWDMNFDSDTNVIEVAIRRLRA KVDDDYPQRLIHTVRGMGYVLEERDE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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