Pseudomonas aeruginosa AZPAE14882, NR98_RS19485

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14882 AZPAE14882_contig_30, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGAGCGCCGCTGCGAGTGCGTCGGTTGGCGGCCTGGTCGGCAGCAACGCCGGTTCGATCCTGTCGGCGCGCAGCAGCAGTACCGTCAACAGCGGCGGGCG CAGCCGCATCGGCGGCCTGGTCGGCGAGAACCAGATCCAGGGACGCATCGTTTCGTCCATGTCGGAAGGCACCGTCAGTGGCGACTACTACGTCTCCATG GGCGGGCTGGCCGGCGTCAACCTGGGATCGATCGAGTACTCCGGCGTCAGCGGCAAGATCGACTTCAAGCCTCAGTCCCATTACGGCCAGATCTACGGTG CGCAGGTCGGCGAGAACCATGGGGTCCTGGGCGGCAACTACGTGATCGGCGAGGCGGCGCTCCTGCCGCCTGCCGGTATCGACTACGGCAACATCTGGTA AGGCCGGCAGGGGAGGTCCCTGGCGGACCTCCCTTCCCGGCCGGGGCCGCTCTCGCCTGGAGTGTGGCCCTCTTCCGCAGGCGCAATCTTGGAGAGTTCC
DNA Sequence for Gene
>NR98_RS19485
ATGAGCATGAGGTTATTTCCCGGCCGCGTTTCCCTGCGCCGCCGGCCTGGCGCGCAGGCTCGGCAGGCGCTCGTTCTCGGCCTCTGCTGCCTGACCGGCG GCCAGGCCTGGGCCCTGAACGAGGTCGCCCTGAACTGCTCGTTCGGCAATGGCAAAGGCTTGCCCTGGCGTGTGGTGAACGAGCTGACCAGCGGCACGGC GAAAGGCACGGTGCTGTTCGCCAGGCCGGTGAGCCTGTTCCTGAACTACAAGCCCCAGGCTTCCCAGGAGGCGCATGAGCTGGTCATCGGGGGGAACTGG TCCGGGGTGGGCTTTCCGGGGCCTTACGGCACGGTGGCGTCCGACGTCAAAGGCATCGGCTATCGGATCTCGGTGGATGCCCAGGACGGCGTCAAGCGGG TGATTCCGGTCGACAACCAGCCCCATGCGCTGGACAAGCGAGTCACGAGCTTTTCCGGAAGCACGACCAGCGACTACCTACAGGAACTGGTCCTGACGGT CGACCCCGGCGAGTTGCCTGCCGGCGACCTGAAGGTAACCAGCGTATCCGGCAGCGCCACCCTGAATCTCTGGGCGGTGGACAGGCTGAAGGGCGAAGCG TCCATCGGCAGCGTCCTGGCGGTGCCTGCGGACAACTACCCCACCGGGGTTTGCCGAAAGCCCTATTCGCTGATCGGCCCGGCCTCCATCGGGATCGGCG GCGGTCCCCCGCCGCCGCCGATCCCGAAGAAATGCAAGGTCGAGGTGGGACGGGAAATCAACGTCAAACTGGGTAGCGTCGCGTTGAAGAACTTCCCGCG GGTCAACGACACCTCCACGGAGCGCTCCTTCGATATCTCTCTCAGCGAGTGTGCGGCGCTGGCCAAGCCGGAAATCGCTTTCCGCGACAAGTATGTCTCG GCGCAGCAAGCGGACCCGACGATCCTCAGCTTGAAGAGCGGCGGCGCGGCGGGGTTCGGCATCGTCGTGAAGAACGGCCTGGACCAGCAGCGGATACGTT TCGACGGCACGCCCTACCCGATGCGGCGTGTCGGCGACAGCGCCGACCTCCCGCTGAGTGCCGCCTACATCCGTATCGGCGCGGAGGGCGAATTGAAGGC CGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTC CAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTG CGTATGGGCGAAGGCTTTCTGAGGGATATGCAAGTTTCCTCGGTAGGATTTCGCGCAAATAAAAGAACGCTATTTTCCAGGCGATAGTTTCAGCTTGTCA CGGAACTCTTTTTTCAAATTTTTTGCTGCTCTGGCTTGTCCGTTTCGTATTTCATCGTTTTTCATAAGTGTCTACGTATACGTTTTTCGGGGGCTGTTTC AAGTGTCTTTGTTGTTAGTTTGCGAGGCGAAAAAATAGTAGTTTTACTATATTAAATATCGTCGGTTTCACTAGAAAATACACATGTTCACTTTGAACCG
Amino Acid Sequence
>fimbrial subunit CupB6
MSMRLFPGRVSLRRRPGAQARQALVLGLCCLTGGQAWALNEVALNCSFGNGKGLPWRVVNELTSGTAKGTVLFARPVSLFLNYKPQASQEAHELVIGGNW SGVGFPGPYGTVASDVKGIGYRISVDAQDGVKRVIPVDNQPHALDKRVTSFSGSTTSDYLQELVLTVDPGELPAGDLKVTSVSGSATLNLWAVDRLKGEA SIGSVLAVPADNYPTGVCRKPYSLIGPASIGIGGGPPPPPIPKKCKVEVGREINVKLGSVALKNFPRVNDTSTERSFDISLSECAALAKPEIAFRDKYVS AQQADPTILSLKSGGAAGFGIVVKNGLDQQRIRFDGTPYPMRRVGDSADLPLSAAYIRIGAEGELKAGVADGAAEFTFTFP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site