Strain | Pseudomonas aeruginosa strain AZPAE14882 AZPAE14882_contig_25, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CACTACACCGACTGGACCATCGGCCATGTCCACGCCGGCGCCCTCGGCTGGGTCGCGATGATCACCATCGGCTCGCTCTACCACCTGATTCCCAAGGTCT ACGGGGTCGAGAAGATGCACAGCGTCGGCCTGATCAATGCGCACTTCTGGCTGGCCACCATCGGCACCGTGCTGTACATCGCCTCGCTGTGGGTCAACGG CATTACCCAGGGCCTGATGTGGCGCGCGGTCAACGAGGACGGCACGCTGACCTACTCCTTCGTCGAGTCGCTGGTGGCCAGCCATCCGGGCTTCATCGTG CGCCTGGTCGGTGGCGGGTTCTTCCTCACCGGCATGCTGCTGATGAGCTACAACACCTGGCGCACGGTACGCCAGGCGCGCCCGGAAGGAATCCTCGCGG CGGCCCGCATGGCCTGAGCCGCGACAGCGCGTCCCTTCCCTTCCCGAGCCTCGCCCGCCACGCTGCGGGCAAGGCTCGACAGCCGACGAGGAGAATCATC
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DNA Sequence for Gene |
>NR98_RS18010
ATGGAATTCAGCTGGAGCGAGATCCTGCTGGAGCTGCTGGCGGTCGCCGTGCTGTTCTTCGGCGTGCATTGGAGCCTGCGCCACGCCAAGACCCTGGACC AGGCGAGCATGCTGCCGTTCGCCGACGACGAGGAGGTGGCCCGCCGGGTCGAGCGGGAAACCGGCAGGAGCCGCACCGGCTGCGGCTGTCCCGGTCGCTG CCAGGGCGACTGCCGGCACTGGGACAAGAATTGGCCGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCCGGCCAGTCGCTTCAGGGCTTTATCTTCTTCAGCTCGTTGAGCAGTTCCAGCAACTGCGCGAGCTTTTCCTCGCCGAACCGCTCCTGGATGCGCTGG TAGTTCTTCTCCATGTCGCCGCTCATGGAGACGAAGCACTGCTGGCCCTTTTCCGTCAGGTTCACGTAGACCCGCCGCTGGTCCTTGGGCGCCTTCCAGC GCCGGACGATGCCGTCGCGCTCCAGGCGCGCCAGCACGCCGGTCATGCTCGGGCGCAGGATGCAGGCCTGGTTGGCCAACTGGTAGCTCTCCATCTCGCC CTGCTGGCGCAGGATGCGGATCACCCGCCACTGCTGCTCGGTGAGACCGTGCTGGTTGAGGGAGGGGCGGAAGAAACTCATCGCGGCTTCGCGAGCCTGC AACAGGGTCAGGGTCAGGGAGGGTCTTGGCGTTGACATAGGGTCCGAGCTTGGATGACTGGTTTCGAAAGTGCAGAAGAGTAGCGGAAAAAACACAGGCT
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Amino Acid Sequence |
>hypothetical protein
MEFSWSEILLELLAVAVLFFGVHWSLRHAKTLDQASMLPFADDEEVARRVERETGRSRTGCGCPGRCQGDCRHWDKNWPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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