Pseudomonas aeruginosa AZPAE14882, NR98_RS12600

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01711
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01711
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF54523 Pili subunits IPR045584 Pilin-like 7 47 2.67E-5
Pfam PF07963 Prokaryotic N-terminal methylation motif IPR012902 Prokaryotic N-terminal methylation site 1 27 6.0E-10
MobiDBLite mobidb-lite consensus disorder prediction - - 203 237 -
NCBIfam TIGR01711 JCVI: type II secretion system minor pseudopilin GspJ IPR010055 Type II secretion system protein GspJ 5 199 4.5E-92
NCBIfam TIGR02532 JCVI: prepilin-type N-terminal cleavage/methylation domain IPR012902 Prokaryotic N-terminal methylation site 4 27 3.9E-9
Gene3D G3DSA:3.10.610.10 - - - 36 143 1.4E-33
Gene3D G3DSA:2.10.70.20 - - - 146 202 2.6E-14
Coils Coil Coil - - 47 67 -
PANTHER PTHR39583 TYPE II SECRETION SYSTEM PROTEIN J-RELATED - - 1 207 8.4E-67
SUPERFAMILY SSF54523 Pili subunits IPR045584 Pilin-like 39 204 3.09E-46
Pfam PF11612 Type II secretion system (T2SS), protein J IPR010055 Type II secretion system protein GspJ 57 197 4.5E-45

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.