Pseudomonas aeruginosa AZPAE14882, NR98_RS00175

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0015562 efflux transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00915
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0042908 xenobiotic transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00915
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00873
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00873
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00873
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1640.10 Multidrug efflux transporter AcrB transmembrane domain - - 516 1020 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 552 569 1.2E-105
FunFam G3DSA:3.30.70.1430:FF:000001 Efflux pump membrane transporter - - 38 137 1.1E-26
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 470 493 1.2E-105
Pfam PF00873 AcrB/AcrD/AcrF family IPR001036 Acriflavin resistance protein 1 1023 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 445 468 1.2E-105
SUPERFAMILY SSF82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 720 806 5.62E-20
SUPERFAMILY SSF82866 Multidrug efflux transporter AcrB transmembrane domain - - 804 1026 1.05E-44
Gene3D G3DSA:3.30.70.1430 Multidrug efflux transporter AcrB pore domain - - 38 818 0.0
NCBIfam TIGR00915 JCVI: efflux RND transporter permease subunit IPR004764 Multidrug resistance protein MdtF-like 1 1033 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 391 415 1.2E-105
PANTHER PTHR32063 - IPR001036 Acriflavin resistance protein 2 1030 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 36 54 1.2E-105
Gene3D G3DSA:3.30.70.1430 Multidrug efflux transporter AcrB pore domain - - 570 669 0.0
Gene3D G3DSA:3.30.70.1320 Multidrug efflux transporter AcrB pore domain like - - 132 331 0.0
SUPERFAMILY SSF82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains - - 565 668 6.02E-25
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 619 633 1.2E-105
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 8 32 1.2E-105
Gene3D G3DSA:3.30.2090.10 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 722 810 0.0
SUPERFAMILY SSF82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 182 271 4.58E-18
SUPERFAMILY SSF82866 Multidrug efflux transporter AcrB transmembrane domain - - 296 498 8.76E-50
Gene3D G3DSA:1.20.1640.10 Multidrug efflux transporter AcrB transmembrane domain - - 7 515 0.0
FunFam G3DSA:1.20.1640.10:FF:000001 Efflux pump membrane transporter - - 323 510 3.0E-72
SUPERFAMILY SSF82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains - - 135 330 4.01E-23
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 336 359 1.2E-105
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 363 384 1.2E-105
Gene3D G3DSA:3.30.2090.10 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 180 278 0.0
SUPERFAMILY SSF82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains - - 38 130 3.14E-24
Gene3D G3DSA:3.30.70.1440 Multidrug efflux transporter AcrB pore domain - - 670 868 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.