Pseudomonas aeruginosa AZPAE14884, NS00_RS01790
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14884 AZPAE14884_contig_4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGGCCAGCACCGCGGAGGGCTTCAGCGCCGCGTCCAGCTCGCGGAAGATCGATTGCTTGAGTTCCAGGTTCTCGTAGACCGCCTCGATCACCAGGTCCGC CTCGCGCATCGCGGCGAGGTGCTGGACCGGCGTGATGCGGGCGCGGCGCGCGGCCGCTTCCTCTTCGCCGATGCGCCCCTGGCGCACGTTGTGCGCGTAG GTGTCGGCCACGGCGCCGAGCGCCTGGTTGAGCATCTGCGGGTTGCTGTCCAGCCACTGCACGTCGAGACCGGCGTTGGCCAGGCACATGACGATACCGC GACCCATGGTGCCGGCGCCGATCACCGCGGCCTGGCGGAAGGAAAAGTTCTGGCTCATGGTCTTGTCCTCGTTGTAGCGAGCGCAGGAGGAACGGTGGAC GAAACCTGGGGCAGTCCGACCGCACAAAAAGCGACCACTACCTTAGGGGAAGGTCGTACTATTTTTGAAATTTAGTCTTGTGATAGCTGGAATTCAGGCA
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| DNA Sequence for Gene |
>NS00_RS01790
GTGAATATCCAAACCTTCGACCTCAACCTGCTACGCGTCCTTGACGCGCTGCTGCGCGAACGCAACGTCTCGCGCGCGGCGGAGCGCCTGGCGCTGAGCC AGCCGGCAGTGAGCAATGCGCTGAACCGCCTGCGCGAGCTGCTCGACGACCCGCTGCTGGTCCGCGCCGGTCGTGCGATGCAGCCGACGCCCCGGGCGCT GGCGCTGGAAGCGCCGATCCGCGCGGCGCTGCGGCAGATCGAACAGAGCCTGGGCGACGGCGAGGGCTTCGATCCGGGGCGCAGCCGGCAGCGCTTCACC GTAGCGGTGACCGACTACGTCGAACTGATCTGCATGCCCGCCCTGATGCGCCGCCTGAGTGAGCGGGCGCCGGGAATCTCCATCGCCATCCAGCACCTGA CCCCGACCTTGCCGGCCGAGGCGCTGGACAAAGGCGAACTGGACCTGGTGCTAGGCCGCTTCGAAAACGTCCCGGCGCGCTTCCAGCGCCGCCATTGGGC CAGCGAGACCCTGCAACTGGTCGCCCGGCGTCAGCACCCGCTGCTGGCGCAGGCTCCCGACCTGGCCACCTTCCTGGAGCTGCAGCACCTGTGGGTGCAC GGCGGGCAGACCAAGGGGATGGTCGACCAGTGGCTGGGCAGCCAGGGGCTCAAGCGGCAAGTGGCCTACACCACGCCGAACTACCTGCAGGCAGCGCACA TCGCCGCGTACAGCGACCTGGTCGGCGTCCTGCCGCGACAACTGGCGCACTACTTCGAACGATTGCTGCCCCTGCAATCGTTCGACCTGCCGTTCGACCT CGGCCCGTTCCACCTGGAACTGGTGTTTCTGGCCCAGCGCGAACGCGACATCGCCCTGCAATGGCTGGTCGAACAGATCCGCCAGGTCGGGGCCGCCGGA CCGGACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGAATCCGGGCAGTCAGAAGCGGTCGCGAATGACCAGTTCTTCCCGCGGCAGCTTGCCGCTGCGCGGCCAGGGTTCAACGGCCTTTTTCCCGACCGCGA CCATCAGGCCGATCACATGGTTGTCCGGCAGGTTGATCAGCCGGGCCACGGCATCGAAGTCGAAACCATCCATCGGACACGAATCCAGGCCCTGGCCGCG GGCGACCAGCATCAGGGTCTGCGCCAGCAGGCCGCAGCTGCGCATGGCTTCGTCGCGCTGTACCTGGGGCTTGCCGCGGTAGTAGGTGTCGATGGCGCCT GCCATGAACGCCTGTACCGCCTCGGGAGCACCGTCCCAGACCCGCTGCGCGTTGCGCTCCCAACTGTCGAGCTGGGCGCACACCACCACCAGCATCGCCG CGTCGGTGACCTGCGCCTGGTCCCAGGCCACTTCACGCAACTGCACGCGCAATTGCGGATCGCTGACCTCGACCAGCCGCACGTGTTGCAGGTTGAAGGC
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MNIQTFDLNLLRVLDALLRERNVSRAAERLALSQPAVSNALNRLRELLDDPLLVRAGRAMQPTPRALALEAPIRAALRQIEQSLGDGEGFDPGRSRQRFT VAVTDYVELICMPALMRRLSERAPGISIAIQHLTPTLPAEALDKGELDLVLGRFENVPARFQRRHWASETLQLVARRQHPLLAQAPDLATFLELQHLWVH GGQTKGMVDQWLGSQGLKRQVAYTTPNYLQAAHIAAYSDLVGVLPRQLAHYFERLLPLQSFDLPFDLGPFHLELVFLAQRERDIALQWLVEQIRQVGAAG PD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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