Strain | Pseudomonas aeruginosa strain AZPAE14884 AZPAE14884_contig_16, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGAACGTTGCCACGAAATCAGCGTCGATGGACAACTCTTATATTCAATAGTTGTACGATCTGAGTTTGTTGTAGTCATTTGTTTAGTTGGCTATTCATAT GATTGCCGTAAAGCAATTATAAGTTTAATTGGATTGGCCTTCTAAGTCTTTGGAAAGAGCCGTGAACGACCCTGTAATATCTGGTTGTAGAGCCGCGTAA TGATGTTTCAGGATATTTCATTAATTTTGTAGATTATTGTTTTTCCTTTGTTTTTTTAAAAACAGCTACCAGATTTAGATAGATATTAATTAACTCGGCC ACGTTTTTTCCTGTTCTATCATTGGCCTTCCTTGGGCGCAGGCCTGCCGAAACTGCTTATCTTCAGGTCCTCGAAAAGTTCATACATCGACCGCCTTGGG CGAAGCATTCGTACGCCGGAAATCTGTCCGGCCGCACGGATGTTTTCAGCATGTTCTCTGGATGAGTTTCCCGATAAACATCAATTAGAGGAGTTTCCCT
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DNA Sequence for Gene |
>NS00_RS22105
ATGTGCGGTCTCGCGGGTTGGGTGGATTACACGCGCAAGCTCGACGACGAATTTCCGGCGATCTTCGCCATGACCGATACGCTCGCCTTGCGCGGGCCGG ATGCCGAGGGCATCTGGAAGCACCGCAACGCCCTGCTGGGTCACCGGCGGCTGGCGGTCATCGACCTCAGCGGCGGCGTGCAGCCGATGTCCTATCGCTT TCCCACCGGCCAGGAGGTCACCCTCGTCTACACCGGCGAGGTGTACAACCACGATGCCCTGCGCGAGCGGTTGCGCCGGGCCGGACATGAGTTCCGCACC CGCAGCGATACCGAGGTGGTCCTGCACGCCTATCTGCAATGGGGCGAGCGTTGTTGCGAGTACCTGACCGGGATGTTCGCCTTCGCCGTCTTCGATGGCC GCGACGGCCACCTGCTGCTGGTGCGCGACCGCCTGGGCATCAAGCCGCTGTATTACGCGCGGCACCGCGAGGGACTGCTGTTCGGCTCGGAGATCAAGTC CATCCTGGCGCATCCGGAATTCGCCGCCAGGCTCGACGCGGTCGGCCTGGTCGACCTCCTGACGCTGTCCCGGGGCACTTCGCAGACGCCGTTCCGCGAG GTCCAGGAACTGCTGCCCGGCCACCTGCTGTCCTGGCGTCCCAATTCCCAGGCGAAGTTGCGCCGCTATTGGGAGGTACGCCGCCAGGAGCATGCCGACG ACCTGCAGAGCACCGTGCAGCGCACCCGCGAACTGGTCACCCGCGCCCTGGGGGCGCAATTGCACGCCGACGTTCCGGTGTGTTCGCTGCTATCGGGTGG GCTCGATTCGACCGCCCTGACCGGCATCGCCCAGCGCATCGCGAAGGCGGAGCACGGCGGCGACATCAATTCATTCTCGGTGGACTTCGTCGGCCAGGCC GAGCAGTTCCGCAGCGACGACCTGCGTCCCGACCAGGACCAGCCGTTCGCCCTGCTGGCCGCGCAGTACATCGGCAGCCGTCATCGCACCGTGCTCATCG ACAATGCCGAACTGGTCTGCGAACGAGCGCGCGAAGAGGTATTCCGGGCCAAGGACGTACCTTTCACCTTCGGCGACATGGATACCTCGCTGCACCTGAT GTTCGGCGAGATCCGCCGGCATTCCACGGTGGCCATCTCCGGTGAAGGCGCCGACGAGCTGTTCGGTGGCTACGGCTGGTTCCGCGATCCGCAGGCGGTG GCTGCGGCGCGCTTCCCCTGGGCCTCCAGGGTGCGCTTGCCGGCCGGCTTCATCGACGCCGGTTTCAACCGCCGCTGCGATCTCCTCCAGTACCAGCAGG CCAGCTACGACGATGGGCTGCGCCAGGTCGAACACCTGGCCGGCGACAGCCCGGAGGAGCGGCGGATGCGCGAGTTCAGCCACCTGCATCTGAAGCGCTG GATGGTGCTGCTGCTCGAACGCAAGGATCGCCTGAGCATGTGCAACGGCCTGGAGGTGCGGGTGCCCTACACCGACCATGAGCTGGTGGAGTACGTCTAC AACGTGCCCTGGTCGATCAAGAGCCGGGACGGCGAGGAGAAGTGGCTGCTCAAGCGGGCCTGCGCCGACTATGTCCCGGAAGCCGTGCTCAAGCGCCGCA AGAGCCCTTATCCGACTTCTGCCAACCTCGGCTACGAGCGTTTCCTGCGCGGGAGCGTGCGGCGCCTGCTGGAGGACGCGGCGAACCCGGTGTTCGGCAT CGTTTCGCGAGAGTTCCTGGCCGCCGAACTGGAGCATCCGGAGGGGTACTTCAACACCCAGGTGAGCCGCCACAACCTGGAGACCGCACTGGCGCTGGAA GGCTGGCTCAGGTTGTACGGGCTCTCCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGTGACGCGGGGCGTGGCGGGTTCGGGCTGCTGTCCGGCCCGCCGGCGTCTTCAGGCGTCGGGCATTTCGCCGCGTTCGCCGAGCCCCACCGGCATGCC TTCCACGCCGGCATGGAACAGCAGGGCTTCCACCGGTTCGGCCCCGGCTATCAGGCGATGGATGATGTTCATCAGGCAACCCGCCGCCTCGCCTTCCAGC ACCCGCGTGCTCTGGGCTCCGTCGCGGGTCTCCAGGCGCAGTTCGCCCTTGAGCACGTAAAGCGCGCTGGGCATCGGATGGACCTGCCAGTCCAGGCGTT CGTGGGCGGCCAGGCTCAGGCGCTGCACGGTGAGCTGCGGCTGGCCAAGGGGATAGCCGAGGTAGAGCGAGCCGTTCCAGGCGCAGCCGCTGCGCAGCAG GGTTTCGCGGTGCGGACTGGTTGCGGCCGGGAGGTCGCGGCTGGGTGGGAACACATGCACGTGGCTGGGGCGAAGGTCCATCGGGCGTCCTGCGCTTGTC
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Amino Acid Sequence |
>asparagine synthase
MCGLAGWVDYTRKLDDEFPAIFAMTDTLALRGPDAEGIWKHRNALLGHRRLAVIDLSGGVQPMSYRFPTGQEVTLVYTGEVYNHDALRERLRRAGHEFRT RSDTEVVLHAYLQWGERCCEYLTGMFAFAVFDGRDGHLLLVRDRLGIKPLYYARHREGLLFGSEIKSILAHPEFAARLDAVGLVDLLTLSRGTSQTPFRE VQELLPGHLLSWRPNSQAKLRRYWEVRRQEHADDLQSTVQRTRELVTRALGAQLHADVPVCSLLSGGLDSTALTGIAQRIAKAEHGGDINSFSVDFVGQA EQFRSDDLRPDQDQPFALLAAQYIGSRHRTVLIDNAELVCERAREEVFRAKDVPFTFGDMDTSLHLMFGEIRRHSTVAISGEGADELFGGYGWFRDPQAV AAARFPWASRVRLPAGFIDAGFNRRCDLLQYQQASYDDGLRQVEHLAGDSPEERRMREFSHLHLKRWMVLLLERKDRLSMCNGLEVRVPYTDHELVEYVY NVPWSIKSRDGEEKWLLKRACADYVPEAVLKRRKSPYPTSANLGYERFLRGSVRRLLEDAANPVFGIVSREFLAAELEHPEGYFNTQVSRHNLETALALE GWLRLYGLSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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