Strain | Pseudomonas aeruginosa strain AZPAE14884 AZPAE14884_contig_12, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGCAGGTCCATCGCGGGGAGATGGCGCCGGGCCCAGCGGCACGACGCGCAGCCTTCGCTGGTGAATACCAACAGCGAAACCCCTTCCAGGGCAAGCAAC TGCCGGTCGGCGTCCAGATCGGTGAGTTCCAGGGACGGCACGCTGCTGACCTCGATAGAAAGGAAGAAATGGGGCCCGACCATCATCCGTAGGCTTCGGC TCCTGCGATAGCGCTGGCGCCCTCCTCGGCCAGCGGATACGCGCAAGGCGCGCCCCTCCGCAGCACCTGCACAATATCGTCCGCGGCGGCCTCACCTGCA ACTCCGCTGGCAGCCTTGGCCCGGAGCAACGAAGAAAACGTGCGCAGAGCGGGGAAAACACCGGCGAACCGCGTCCCGCCCATTGTCTAGGCCCGGCCCG ACACGTTAAGGTTCGTCTCCCCGTTTGCGAACTTCATGCCTGCGCCCTTTCGCAGGGGGCCTCCCGGCGACCGGCGCCCGTGACCTGATTGAGTACCACG
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DNA Sequence for Gene |
>NS00_RS16130
ATGGCTGATTTACAGATCGACGACCTTAACGTTGCCTCCAACGAGACCCTGATCACGCCGGAGCAGCTCAAGCGTGAAATTCCCCTGACCGACAAGGCCC TGCAGACCGTGGCCCATGGTCGCCAGGTGGTGCGCGACATCCTGGATGGCAAGGACCACCGTCTGTTCGTGGTGATCGGCCCCTGCTCCATCCACGACAT CAAGGCCGCCCACGAATACGCCGACCGCCTCAAGGCGCTCGCGGCCGAAGTGGCGGATACGCTGTTCCTGGTGATGCGCGTGTACTTCGAGAAGCCGCGT ACCACGGTGGGCTGGAAAGGCCTGATCAACGATCCGTACCTGGACGACTCGTTCAAGATCCAGGATGGCCTGCACATCGGTCGCCAACTGCTCCGCGACC TCGCCGAGAAAGGCTTGCCCACCGCCACCGAAGCGCTCGACCCGATTTCCCCGCAGTACCTGCAGGACCTGATCAGCTGGTCGGCGATCGGCGCCCGTAC CACCGAATCGCAGACCCACCGCGAGATGGCCTCCGGCCTGTCTTCCGCGGTCGGCTTCAAGAACGGCACCGATGGCAGCCTGACCGTGGCGATCAATGCC CTGCAGTCGGTCTCCAGCCCGCATCGCTTCCTCGGCATCAACCAGCAGGGCGGCGTATCCATCGTCACCACCAAGGGCAACCGCTATGGTCACGTGGTGT TGCGCGGCGGCAACGGCAAGCCGAACTACGATTCGGTCAGCGTCGCGCTCTGCGAGCAGGACCTGAACAAGGCGAAAATCCCGCTGAACATCATGGTCGA CTGCAGCCACGCCAACTCCAACAAGGACCCGGCCCTGCAACCGCTGGTGATGGACAACGTCAGCAACCAGATCGTCGAAGGCAACAACTCGATCGTCGGC CTGATGGTGGAAAGCCACCTGGGCTGGGGCAGCCAGCCGATTCCGAAGGATCTCGACCAACTTCAGTACGGCGTCTCCATCACCGATGCATGCATCGACT GGGCGACCACCGAGAAGAGCATCCGCAGCATGCACGCCAAGCTCAAGGACGTGCTGCCGAAACGCCAGCGCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGAGGCGGAAACGAAAACGCCGGGCTGATGCCCGGCGTTTTTCATTGCGCGCCTGCTCAGGCGGCCGGATCGGCCTGACGCTGGCGACGCTCGATGTAA CGCTCCACGTAGGAGCAGGACGGGATCACGCTGTAGCCCATGCGGTCGGCGTACTGCAGGGCGTGTTCGGTCAGCGCGGCGGCGATACCGCGACCCCGCA GCGAATCCGGTACGAAGGTCCGGTAGATGTCCAGCGTCTGCTTGCCCAGGTCCATATACGCCAGATAGGCACGATGGCCATCCACCGTCGTCTCGAACTG ATGGCCGCCCACGTCATGATGGATGGACAGGGACTCGCTCACTTTGGATCTCCTCAACGGGTTCGTAACCCGACCCGCGCCTGATTGATAGGGTTCCTCG CGAGGATGCCCCCGCGTACCGGCCTTCAGCAGGCCGCCGGATAACTTCGTCCGTTCTCGTCCCGGCGGCTGAGCGCGCCTGGCGGACATCCTCGAAACGG
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Amino Acid Sequence |
>phospho-2-dehydro-3-deoxyheptonate aldolase
MADLQIDDLNVASNETLITPEQLKREIPLTDKALQTVAHGRQVVRDILDGKDHRLFVVIGPCSIHDIKAAHEYADRLKALAAEVADTLFLVMRVYFEKPR TTVGWKGLINDPYLDDSFKIQDGLHIGRQLLRDLAEKGLPTATEALDPISPQYLQDLISWSAIGARTTESQTHREMASGLSSAVGFKNGTDGSLTVAINA LQSVSSPHRFLGINQQGGVSIVTTKGNRYGHVVLRGGNGKPNYDSVSVALCEQDLNKAKIPLNIMVDCSHANSNKDPALQPLVMDNVSNQIVEGNNSIVG LMVESHLGWGSQPIPKDLDQLQYGVSITDACIDWATTEKSIRSMHAKLKDVLPKRQRG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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