Strain | Pseudomonas aeruginosa strain AZPAE14884 AZPAE14884_contig_10, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAACGACCGATGGCGCTGGCCAACCCGGCCACGGTGCAGATGTGCGAGCAGCAGTGCGAGGCGCTGCTGGCCACCCTGGACGTCCAGGAAGGCCTGCTGA CCCGTGTGCGCCGCCTGCTGCTGGCGCGTCCCGGCGACTTCCCCGATCTCGAACAGGCCGCCCGCGAACTGCACACCAGCGGGCGCAGCCTGCGCCGGCA CCTGTCGTCGTTGGGCACCACCTACCAGCAGGTCCTCGACGATGTGCGCAAGCGCCTGGCCCTGCAATACCTGACCACCACCCAGCTACCGCTGTACGAG ATCGCCCTGCTGCTCGGCTTCAACGATTCGTCGAACTTCCGCCGGGCGTTTCGCAAGTGGACCGGCAAGCTGCCCAGCGACTACCGCGAAGCGCCCTGAG CCGACGCCGGCGATCCTCGGCAGCGGATGGATGTGCCATGCTTGGCGTTTCATAGAAATCCATGGCGCGCTTGCCGCGCCGACCGTGATCGGAGTCTTGC
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DNA Sequence for Gene |
>NS00_RS11080
ATGTCGACATCCCCCGCGCTGATCCGCGAAACCTTTCCTGTCGGGCCTTTGCAGTGCAACTGCACCATCATTGGCGATCCGCTGACCAGGAAGGCCATCG TCGTCGATCCGGGCGGCGACCACGAACTGATCCTGCAGCGCCTCGACCGCCTCGGCCTGCAGGTGGTCAGCATCATCCATACCCACGCGCACCTGGATCA CTTCCTCGCCTCCGGCGAGATGAAGAAGCGCACCGGCGCCAGCCTGCACCTGCATAAGGACGACCAGTTCCTCTGGGACAACCTGGAGATGCAGTGCCAA CTGTTCGGCGTGCCCTACACGCCGGTGCCGGCCCCGGACCGCTGGCTGGCCGACGACGAGGAACTGGCCTGCGGTTGCGGAGTGGCACTGCACACGCCGG GGCATACGCCGGGCTCGATGAGTTTCTGGTTCCCCCGGGCGAAGCTGCTGATCGCCGGCGACACCCTGTTCCGCCGTGGCATCGGCCGCACCGACCTGTG GGGCGGCGACTCGGCGGCGATCCAGCGTTCGATCAGGCAGCGTCTGTACAGCCTCGACGAGGACGCCACGGTGGTCGCCGGCCATGGCCCGGACACCACG CTGGGCGAAGAGATGCGCGAGAACCCCTTCGTCAGGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAAGGATTTTTCCGAGCATCGGGAATTTTGCCACCTGGCTATGCTCTAAGATGTCGGCCGCCCCTCACGCAGGGGCGTTTCAGTACCTCGAGGAGTAGTT TTCCCATGTTCACCTCCCGTTGCCTGCCTCTGGCCGCAGCCGTCACCGCACTGGCGCTGCTCGCCGGTTGTGCCAACAACAACCCCTACGACACGCAAAG CCAAAGCCAGGGTGGCATGAGCAAGACGGCCAAGTACGGCGGACTGGGTGCGCTGGCCGGCGCCGTCGCCGGCGCCGCGATCGACCACAACAACCGTGGC AAGGGCGCGCTGATCGGCGCTGCCGTTGCCGGCGCGGCCGCCGCGGGTTATGGCTACTACGCCGACAAGCAGGAAGCCGAGCTGCGTCGGCAGATGGAAG GCACCGGCGTGGAAGTGCAGCGCCAGGGCGACGACATCAAGCTGATCATGCCGGGCAACATCACCTTCGCCACCGATTCGGCGAACATCGCTCCGAGCTT
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Amino Acid Sequence |
>beta-lactamase
MSTSPALIRETFPVGPLQCNCTIIGDPLTRKAIVVDPGGDHELILQRLDRLGLQVVSIIHTHAHLDHFLASGEMKKRTGASLHLHKDDQFLWDNLEMQCQ LFGVPYTPVPAPDRWLADDEELACGCGVALHTPGHTPGSMSFWFPRAKLLIAGDTLFRRGIGRTDLWGGDSAAIQRSIRQRLYSLDEDATVVAGHGPDTT LGEEMRENPFVRG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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