Pseudomonas aeruginosa AZPAE14891, NS08_RS08130

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14891 AZPAE14891_contig_6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTACAGCGAGGCGATCGTGGTGATGGCGCGCCCCGGTCACCCCCTGGCCCAGGCCGCCGCGCTGGACTGGGAAGACGTGCGGCGCTACGACTGGATCGTC TGGCCGCCCGGCTCGCCGATCCGCAGCAAGCTCGACATGGCCCTGACCCAGGGCGGCCGGCAGCCGCCGGCCTACCGCCTGGAGTCATCGTCGATGCTGG CCAACATCGAATTGTTGCGTGGCAGCGACATGCTATCCATCGGCTCGGCGCGGGTGGTCGAGCACCTTGCCGGGCTCGGCCTGGTGGCCAGGCTGGCGTT GGAGATTCCCGGCGAGGGCGCGGTGGGCATGTGCTGGCGCGACGAGCCGCACCGCGACCGTGCCAGCGAAGACCTGCTGGCCTGCCTGCGCGAAGGCGCG GCGGCCGAGTAGGGCGCCGGCCGGCGGGTGCTATTGCAAAAAGGCCGCGGCTTCTCGACAATGCGATTCATTATCATTCATGTGTCGCCCCGACTTTCCC
DNA Sequence for Gene
>NS08_RS08130
ATGTCCGCCCCGATCCTTCTCAGCGCCCACCATCGCGCCATGCATGCGCTGTACAGCGAGCACCATGGCTGGTTGCAGAACTGGTTGCGCGGCAAGCTGG GCTGCGCGGCGGACGCGGCGGACCTGGCCCAGGACACCTTCCTGCGCATCCTGCTCAAGCGCGAACTGCGCGAGATCGGCATGCCGCGCGCGTTCCTGCG GACCATCGCCCGCGGCCTGGTGATCGACCACTGGCGTCGCGAGGAACTGCAGCGCGCCTACCTCGAAAGCATCGCCCACCTGCCCGAGGCACAGGCGCCG TCGCCCGAGGCGCGGGAACTGGTGCTGGAACTGCTGGAGGAAATCTCGCGGATGCTCGACGGGCTCAAGCCGAAGGTCCGCACCGCCTTCCTCCTGGCCC AGTGCGAAGACCTCAGCCACCGGCAGATCGCCGAACGCATGGGGGTTTCCCAGCGTAGCGTCGAGCGCTACGTGGCCGAGGCGCTGTACCACTGCTACCT GCTGCGCTACGGCGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGAGCCGTGGACGGGACGCGCGGTAGGGTCGACGAAGCGGTGGTCAGGCAGGCCATCCACTGGCTGGTCCGCCTGCGCTCGCAGCCGGCCGACGATCG CCTGCAGCGCGCCTGCGCGGCCTGGCGCGCGGAGCACGGCGAGCACGAGCGGGCCTGGCAGCAGGTCAGCGCGCTCAACGAAGAACTGCAAGGACGCTTC AAGGCGCTGCCCGGCGGGGTCGCCTACGGCACCCTGGACAGTAGCGCGCAGCGCCTGCAGCGGCGCCAGGCGCTGAAACTGCTGTCGCTGCTGGTGGCCG GCGGCGCCGTGGCCTGGGTCGGTCGCGATAGCCTGCCCTGGCAGCGCCTGAGCGCCGACTACAGCACCGCCACCGGCGAGCGGCGCAGTATCGAGCTGGT CGACGGCACCCGCCTGCAACTGAACACCGACAGCGCGGTCGACGTGCGCTACGACGCCGGCCAGCGCCTGATCCTCCTCGCCCGCGGCGAGATCTTCCTC
Amino Acid Sequence
>RNA polymerase sigma factor
MSAPILLSAHHRAMHALYSEHHGWLQNWLRGKLGCAADAADLAQDTFLRILLKRELREIGMPRAFLRTIARGLVIDHWRREELQRAYLESIAHLPEAQAP SPEARELVLELLEEISRMLDGLKPKVRTAFLLAQCEDLSHRQIAERMGVSQRSVERYVAEALYHCYLLRYGE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site