Strain | Pseudomonas aeruginosa strain AZPAE14891 AZPAE14891_contig_6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATCATCGAGCGCCGCGACGGCAGCCTCGCGCACATGCCGATGCGCACGCCGGTCAGTGAGCGCGAAGCCCTGCAACGCCTGATCGAAAGCTGCATCGACG ACTGATACCTCCAGTGCCCGTGTGCCGCTCTCAGGAGCGGCCAGCGGCGTTTTCCCAATCCGCCACCAGCGTCCGCAGTCGCGCGTCGCGCAGTTCGAAG AGTTCCAGCAGCCCCAGTGCCCGGATCGCCGGCAGCAGGGCGCGCAGGTCTTCTTCAGCCTGCCGCCGTTGCGCCGTGGGCAGTTCCTCCTCAAGCAGCA GCCGGGCGTTGGCGATGAACGCGCCGACGCTGCCCTTGCGTATCTCCACGCCGCCCAGGCGGATGCGGTCCTGTCGGTCGGGAAGGATGTCTTCGGCTTT CATGGCGTGCTCCAGGCAAGAATGATGAGCCGCCAGGCTACATCCGCAGTCGAATGGCCTATTATCCATCCCGAGCCAATCATCGTCGCTTTTCCGCCAA
|
|
DNA Sequence for Gene |
>NS08_RS08035
ATGCTTCCGGAACCCCTGCCCGTCCCGCTCTTCGCCCTGCGCATCGACCGCGCAGCCAGCCGCACGGCCTCCCACCGCCATGCCTGCGGCCAGCTCTACT GCCTGGAGCGCGGCCTTCTGGTGGTCGAGGACGAGCATGGCCGCCAGGCCCTGCCTCCGCGCCAGATCGCCTGGATCCCACCGGGTCACCCACACTCGGC GCACTCCCACGGCAGCCTGGCGGGCTGGAGCGCCTACCTCGCCGCCGAACACTGCCGCGACCTGCCCCGGCACCCCGGCGTGCTCGCCTGCTCGGCTTTC GTGGCGCTGATCGTCGAACGCGCCACCCGCTGGCCGACCGGCTCCGCCTGGAGCACCGAACGCGAGAACCTGCTGCGCGTGCTGCTGGACGAACTGCGCC ACGCCGTGCCCCAGCGGACCCGCCTGCCCTATCCGGGGGATTCGCGCCTGCGCAGGATCGCCGAGGCATTGCTGGCCAACCCCGGCGATCCGCGGCCGGC GGCCGAATGGGCACGCTGGGCGGGCCTCAGCAGCCGTAGCCTGAGCCGGCTGTTCGGCGCCGAGACCGGTATGAGCTTCGCGCAATGGCGGCAACTGGCG CGACTGCACGCGGCCGTCGAACGGCTGGCAGCGGGCCAGGCGGTCGGCGAGGTCGCCTGGTCGCTCGGCTACGAAAGCCCGAGCAGCTTCGCCAGTGCCT TCCGCACAGTATTCGGCGAGACGCCGTCCGGCTATTCCAGTCGCGCCAACGAAGCGCTAGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ACCTTCCGCGCCACGAGCCTTTCCCCATGAGCCACGCCAATACGCCCCGCGACTGGGTTCGACGCGCCCCGCAACACGGTGCGGTGGAACGCATCGAGGC TTACTTCGCCGGCCACGGCTACGATCCGCATCGCCACGACACCTATGCCATCGGCCAGACCCTGGCCGGGGTGCAGAGCTTCCGCTATCGCCGCAGCCAG CGCCACAGCCTGCCGGGCGGCTGCCTGGTGCTGCATCCCGACGAACTGCACGACGGCGAGGCCGGCAGCCAGGAAGGGTTCCGCTACCGGATGCTCTACG TCGAGCCGGCGCTGATCCAGCAGGCCCTCGGCGGCCGGCCGCTGCCGTTCGTGCGCGGGGGCTTGTCCGACGACCCGCGCCTGATCGCCGCCAGCCGGGC CCTGCTACAGGCCATGGATACCCCGCTGGAGCCGCTGGAAGAACAGGACGCCCTGTTCGAACTGGCCCACGCCCTCGACGCCGTGGCCGGCAACCGGGCG
|
|
Amino Acid Sequence |
>AraC family transcriptional regulator
MLPEPLPVPLFALRIDRAASRTASHRHACGQLYCLERGLLVVEDEHGRQALPPRQIAWIPPGHPHSAHSHGSLAGWSAYLAAEHCRDLPRHPGVLACSAF VALIVERATRWPTGSAWSTERENLLRVLLDELRHAVPQRTRLPYPGDSRLRRIAEALLANPGDPRPAAEWARWAGLSSRSLSRLFGAETGMSFAQWRQLA RLHAAVERLAAGQAVGEVAWSLGYESPSSFASAFRTVFGETPSGYSSRANEALA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|