Strain | Pseudomonas aeruginosa strain AZPAE14891 AZPAE14891_contig_33, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AACGCCTGCTGCCCTACCTGGGCCTGCTCAGCCTGCGGGCGCACTCGGCGGCCTTGATCGAGTCGGTGCTGCGCTACTACTTCAAGCATGCCGAACTGGT CGCCGAGCAGTGTATCGAACGGCGCGTCGCGATCCTCGAAGAGCAGCGCAACCGGCTCGGCCTGTTCAACAGCCAGCTTGGCGAAGACGCGGTGCTGGGC GAACGGGTCCGCGACCGCAGCGGCAAGTTCCGCATTCATATCCGCCAGCTCGACTGGCAGCGCTTCCACGAGTTCCTGCCGATCGGTCCCGGCTACCAGC CGCTTTGCGCGCTGGTTCGCTTCACCCTGCGCGACCCGCTCGACTACGACATCCGGCTGGTCTTGCGCCACGAGGAAATCCGTGAGTTCCGCATCGGCGC GCAGAACGCCTGCCGCCTTGGCTGGACCAGCTGGCTGGGCCGGGAGCGCGCGGATGGCGTGGTGACGCTGGGCAGCAAGATTCATTAAGGATGGATGAGC
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DNA Sequence for Gene |
>NS08_RS25055
ATGATCAACGTAGACCTGCAACAACTGATTCAGGCGCTGGATGCCGACACCCGGCGCGACCTCGAAGGCTCGGCCGAGCGCTGCGTAGCCCGTGGCGGCA GCAAGGTACTGGTGGAGGACCTGTTGCTGGGCCTGCTGGAGCGTCCCCAGGGACTGCTGGCGCGCGCCCTGCAGGATGCCGCGGTGGACGCCGGCGAACT CAACGCCGCGTTGCAAGCGCGGGGCGAGCATAGTGCCTCGCGCAATCCGGTGTTCGCGCCCGAGCTGGTGCAGTGGCTGCAGGATGCGCTGTTGCTGGCC AACCTCGAACTGGGCCGTAGCCAGATCGACCAGGCGGCATTGATCCTGGCCCTGCTACGCAACCCGTTGCGCTATGCCGGCAGCCGCTACCAGCCGCTGC TGGCGCGGCTCGACATCGAGCGGTTGAAGGATTTCGCGCTCTCGCAGCCGCTGGAGGGCGCGCCCAGCGGCAAGCCGGGCGGCGGCGAGTCCCTGTTGCA GCGTTTCACCCACAACCTTACCCAGCAGGCGCGCGACGGCAAGCTCGATCCGGTGCTCTGTCGCGACGGGGCTATTCGCCAGATGGTCGACATCCTGGCC CGTCGGCGGAAAAACAACCCCATCGTGGTCGGCGAGGCCGGCGTCGGCAAGACCGCCATCGTCGAAGGCCTGGCCTCGCGGATCGCCGCAGGGGAAGTGC CGCCGGCGCTGAGGGACGTCGAGCTGTTGTCCCTCGACATGGGCCTGTTGCAGGCCGGTGCCAGCGTGAAGGGCGAGTTCGAGCGGCGCCTGAAAGGCGT CATCGACGAAGTGAAGGCAGCGCTCAGGCCGACCATCCTGTTCATCGACGAGGCCCATACGCTGATCGGCGCGGGCGGTCAGGCCGGCGGCTCGGATGCC GCCAACCTGCTCAAGCCGGCCCTGGCACGTGGCGAGTTGCGCACCATCGCGGCGACGACCTGGGCCGAATACAAGAAGTATTTCGAGAAGGACCCGGCGC TGGCCCGGCGCTTCCAGCCCGTGCAGTTGCATGAGCCGAGCGTTGCCGAGGCGGTGACGATCCTGCGTGGCTTGGCCCGGGTTTACGAGGAAAGCCACGG TATCTACCTGCGCGACGACGCGGTGGTGGCCGCCGCCGAACTGTCCGCCCGCTACCTGGCGGGTCGCCAGTTGCCGGACAAGGCCGTCGACGTCCTCGAC ACCGCCTGTGCGCGGGTGCGCATCAGCCTGGCGGCGGCGCCGGAGAGCCTCGAGCGCCTGCGCGGCGAGCTGGCCGAAGGCGAGCGCCAGCGCCAGGCCC TGCGCCGCGATGCCGAGGCAGGCCTGCCGATCGACCACGATGCCCTGCAGGCGCTGGAGGAGCGCCTGGCCCAGGCGGAAAGCGAGCGGCACGTACAGGA GGACCAGTGGAGCCGCCAGCGCGAACTCGCCGAGCGCCTGCTCGCCCTGCGCCAGCAATTGGCCAGGGCCCGCGAGGCGAACCGGGAAGAGCAGGGCGGC GAGGCGGACGCGGAGACTTTCCCGGCCGACGAGCATGGCGGTGTCGAAGCCCTGGAAAAGGCCCTTCACGAAACCCGCCAGGCGCTCGCCGATGCCCAGG CCCAGGGGCGGCTGGTCAGCTTCGAGGTCTGCCCGCGCCTGGTTGCCGAGGTGATCGGCGCCTGGACCGGCGTACCGGTGGAACAACTGGCGCGGGAACA CAACGCCAAGGTGATGGGTTTCGCCGACGACCTGCGGGCGCGGATCCGTGGCCAGGAACAGGCGGTCAGTGCCCTGGACCGCGCGATGCGCGCCACCGCG GCCGGGCTGAACAAGCCCGATGCGCCGGTCGGCGTGTTCCTGCTGGTGGGCCCGAGCGGGGTGGGCAAGACCGAGACCGCGCTGGCGCTGGCCGACCTGC TGTATGGCGGCGAGCGTTTCATCACCACCATCAACATGTCCGAGTTCCAGGAGAAGCACACCGTCTCGCGCCTGATCGGCGCGCCGCCCGGCTATGTCGG CTATGGCGAGGGTGGCATGCTCACCGAGGCGGTACGCCAGAAGCCCTATTCGGTGATATTGCTGGACGAGGTGGAGAAGGCCGATCCGGACGTGCTCAAC CTGTTCTACCAGATCTTCGACAAGGGCGTGGCCAACGATGGCGAAGGGCGCGAGATCGATTTCCGCAATACCTTGATCCTGATGACCTCCAACCTCGCCA GCGAGCACATCGCCGCGCTTTGCCAGGACGGCGCGCGGCCTTCCGCCGAACTCCTGGAGGAAACCATCCGGCCGGCGCTCAGCCGGCATTTCAAGCCGGC GCTGCTGGCGCGCATGCGCGTGGTGCCTTACTACCCGGTGGGCGGCCCGGTACTGCGCGAGCTGATCGAGATCAAGCTGCAACGCCTCGGCGAGCGCCTG GCGCGCCGTCAACTGGCTTTCGACTACAGCCAGGCGCTGGTGGGCCACCTGGCCGAGCGTTGCACCCAGAGCGACAGCGGCGCACGGTTGATCGACCACC TGCTGGACACGCACCTGCTGCCGCTGGTGGCCGACCGTTTGCTGGAAGCGATGGCGCGCGACGAGCGTCTCGAGCGGGTCCATGCGACGCTGGGCGAGCA CGGCCGCGTGCTCTGCGAGTTCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGTGGGTGCGATGTTCAGCCGCGTACCGCAACCCCTGGCCTTCGCCGAAGCCCTGCTCGCTCAGTTCGGCGCGCTGTCGCGGGAAACCGACATCACGGCC CTGCTGGGCGGTTTCGCACGCGCAGTCGGCGAACTCAGCGGCTGCGAGCTGAGCCAGTTGTATCTGCTCGACCAGACCCATACCGCGCTCACCCTCAACG CCGAATGCCGGGACGGCCTGTTGCAGGCGCTGGAGCCGTCGAGCCTGCCGGCGGACTACACCGGCGAGCAGTTGCTGCAGTTCGCCCTGTGCCAGAACCG CGTGGTCAGTCTCGTCGACCTGCCGTCGCGGCTGCACGAGACCGGCTTCCTGCCGGCAGGGGAGCAGCCCTGGCTGTCCCTGCTCTGCGTTCCGCTGGTG AGCCCGGAGAAAACGGTCGAGGGCATGGTGGTCTGCGCTACCCGGCGCCCACTGGACCTGCAGGGATTCGCCCATCCACTGGGCCAGCTGGGCTCGTTCG
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Amino Acid Sequence |
>ATPase AAA
MINVDLQQLIQALDADTRRDLEGSAERCVARGGSKVLVEDLLLGLLERPQGLLARALQDAAVDAGELNAALQARGEHSASRNPVFAPELVQWLQDALLLA NLELGRSQIDQAALILALLRNPLRYAGSRYQPLLARLDIERLKDFALSQPLEGAPSGKPGGGESLLQRFTHNLTQQARDGKLDPVLCRDGAIRQMVDILA RRRKNNPIVVGEAGVGKTAIVEGLASRIAAGEVPPALRDVELLSLDMGLLQAGASVKGEFERRLKGVIDEVKAALRPTILFIDEAHTLIGAGGQAGGSDA ANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPSVAEAVTILRGLARVYEESHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDVLD TACARVRISLAAAPESLERLRGELAEGERQRQALRRDAEAGLPIDHDALQALEERLAQAESERHVQEDQWSRQRELAERLLALRQQLARAREANREEQGG EADAETFPADEHGGVEALEKALHETRQALADAQAQGRLVSFEVCPRLVAEVIGAWTGVPVEQLAREHNAKVMGFADDLRARIRGQEQAVSALDRAMRATA AGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGERFITTINMSEFQEKHTVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVILLDEVEKADPDVLN LFYQIFDKGVANDGEGREIDFRNTLILMTSNLASEHIAALCQDGARPSAELLEETIRPALSRHFKPALLARMRVVPYYPVGGPVLRELIEIKLQRLGERL ARRQLAFDYSQALVGHLAERCTQSDSGARLIDHLLDTHLLPLVADRLLEAMARDERLERVHATLGEHGRVLCEFA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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