Pseudomonas aeruginosa AZPAE14891, NS08_RS22220
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14891 AZPAE14891_contig_26, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCTCGTGGGTCAGCCAGTGCACCCGCGAACAGCCAGCGGCGCCGGCCTCGGCGTAGACATGCTCGATCAGCCGGCGCCCTATGCCTTCGCCGCGCAGGCC CTCGGCGACGAACAGGTCCTGCAGGTAGCAGTAGTCGCCGACGGTCCAGCAGGAGCGGTGGTAGATCCAGTGCACCAGGCCCACGGCGCGCTCGTCGAGC CAGGCGAGGGCGGCGTTCATCGGTTCGTCGGCGTCGAGGAAGCGCTGCCAGGTGGCGTCGCTGGTAGCGGCGGCGATCTCGGTCTTGTAGAAGCGCTGGT AGCCCTCCCACAGCGGCAGCCAGGCGGCGTGGTCGCCGGCGCCGACGGGACGAATCTGCAGGGACGTGCTCATGGCTCGGTTCCATGTCCGGGTAAAGGT GCCTCCAGACTAGGCCGGGAAATGGTCCGCTAGAAGATCCATTGCTGGTCAATTCCACAGGTCCAATCCACACTGGCGCTTTCTTCCCTCCGAGACCGCC
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| DNA Sequence for Gene |
>NS08_RS22220
ATGGCCACCGTACTGCCCTTCGACGCCGCCGGCATCCACCTCGACCCCGCCCAGGGCCTGGCCCGCCAGCTCTACGCCGCGCTGCGCGAACGGATCCTCG ACGGCCGCCTCGGCAGCCGCACGCGGATGCCCGCCAGCCGCGAGCTGGCCCAGGCCCTGAAGGTCTCGCGCAACACCGTGGTGCGGGCCTATGAACAGTT GCACGCCGAGGGCTATATCGACGGGCGCACAGGCGACGGCACCTACGTTGCCGAGTTGCAGGAAATCCCAGGCAGGGCCCCCGCCGTCGCCCCGAGCGCT CCCGCGCCGCGCGGCCCGGCGGCCCTGGCGCCGCCACCGGAAGGCGCGCCGCGAGCGTTCCGCGTCGGCGTGCCGGCCTTCGACCTGTTCCCCTTCGACA CCTGGGCGCGGCTACAGGCGCGCTTCTGGCGCAACCCACCGGCGGACTGCCTGGGCTACGGCGACCCGGCCGGCGAGGCGCGCCTGCGCGAGCTGATCGC CGCCTACCTGCGCAGCGCGCGCGGCCTGCGCTGCGAGGCGGAACAGGTGATCGTCACCCATGGCGCGCAGCAGGCCATCCGCCTGTGCGCCCAGGTGTTG CTCGAGAACGGCGATCCGGTGGCTGTGGAAAACCCTGGCTACCGCGCGGCGCGCCTGGCCTTCGCCGCGACCGGCGCGGTACCGCACGGGATCGACCTCG ACGCCGAGGGGCTGCGCAGCGACCGGCTCGCGGGCATTGCCGGCTGCCGCCTGGCCTATGTCACGCCGTCACACCAGTACCCCACCGGCGTCACCCTGTC GCTGGCGCGGCGCCTGGAGCTGCTGGAGTGGGCCGAGCGCGCCGACGGTTGGATCGTCGAGGACGACTACGACGGCGAGTATCGCTACAGCGGTACGCCG CTGGCGCCGCTGGCCGCGCTGGACCGACAGGGCCGGGTGCTCTACGTCGGGACCTTCTGCAAGATCGCCTTCCCGGCGTTGCGCCTGGGCTACCTGGTGG TCCCGCCGGCGCTGGTCGAGCGCTTCCGCCAGCGGCGGGCCATCGAGGTACGCCATTCGGAGGTGGGCACCCAGCGGGTCATGGCCGACTTCATCGCCGA GGGGCATTTCCAGCGCCACGTCCGCCGCATGCGCCGCGCCGCCCGCGCCCGCCGCGACGCCTTGCTGCGGGGCTGGCCAGAGGCGCCGGGTTGCCAGCCG TTGCCGGCGGTGGAGGCGGGGCTGCACCTGTGCGTGCGGGTCGACAGCCTGGCGCGCGAGCGGGCCCTGATCGCCGCGGCGGCAGCCGCCGGGGTGGAAG TCAGCGCCTTGAGCGACTACTGGATGGACGACTCCAGCGTTGCGCCAGACGACCGCGCGGGCCTGGTGCTGGGCTTCGCGGCAGTACCCGAGGCGCGTAT CGACGAGGCGCTGCGGGCGTTGCGCAAGGCCTGGCGGCGGGAGGCCCTGGTTGGACCCGTCGTCGCGACTGACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AATGCCCCCGGATCACCCTCGCGCCCAGGAGTAGCCATGAGTGTCGCCCTTTCCGCCGCGCCCGAGCGCAAGCTCGCCGCCCCCCTGATCGCCTTCGCCC TGCTGGTGCTCGGCGGGCTGTTCCTGTTCAACGCGGTCAGCGCGCGCCAGGCCATCCTCTTCATCGTCGGCGGCGCCCTGGGGCTGACCCTCTACCACGC CGCCTTCGGCTTCACCTCCGCCTGGCGGGTATTCATCCGCGAACGGCGCGGCGCCGGGCTGCGCGCGCAGATGGTGATGCTGGCGCTGGCGGTGCTGCTG TTCTTCCCGGCGCTGGCGGCGGGCAGCCTGTTCGGCCAGCCGGTGAGCGGTTTCGTCTCGCCGGTCGGCACTTCGGTGATCGTCGGCGCCTTCATTTTCG GCATCGGCATGCAACTGGGCGGCGGCTGCGCCTCCGGCACCCTGTTCACCGTCGGCGGTGGCAACGCGCGGATGCTGGTGACCCTGCTGTTCTTCATCCT
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| Amino Acid Sequence |
>aspartate aminotransferase
MATVLPFDAAGIHLDPAQGLARQLYAALRERILDGRLGSRTRMPASRELAQALKVSRNTVVRAYEQLHAEGYIDGRTGDGTYVAELQEIPGRAPAVAPSA PAPRGPAALAPPPEGAPRAFRVGVPAFDLFPFDTWARLQARFWRNPPADCLGYGDPAGEARLRELIAAYLRSARGLRCEAEQVIVTHGAQQAIRLCAQVL LENGDPVAVENPGYRAARLAFAATGAVPHGIDLDAEGLRSDRLAGIAGCRLAYVTPSHQYPTGVTLSLARRLELLEWAERADGWIVEDDYDGEYRYSGTP LAPLAALDRQGRVLYVGTFCKIAFPALRLGYLVVPPALVERFRQRRAIEVRHSEVGTQRVMADFIAEGHFQRHVRRMRRAARARRDALLRGWPEAPGCQP LPAVEAGLHLCVRVDSLARERALIAAAAAAGVEVSALSDYWMDDSSVAPDDRAGLVLGFAAVPEARIDEALRALRKAWRREALVGPVVATD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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