Pseudomonas aeruginosa AZPAE14891, NS08_RS21885
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14891 AZPAE14891_contig_26, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAAGGAAAAGGTCGAGGTCTACAGCTACGAGCTGCTGGCCTACCGGACCCTGGTCAACGCCCAGGCCCTGCCGGACAGCGACGACCCGGCGCGACGCCTG CCGGACTACTTCATCACCGCCGACAGCGTCACCCCGGCGCAGCACGTGGACATCCAGGCGGCGGCGCAGAAGTGGGTCGATTCGTCGATCTCCAAGACCG CCAACGTGCCCACCGACTACCCGTTCGAGGACTTCAAGGACATCTACCGCTACGCCTGGCACCAGGGACTCAAGGGCTGCACCACCTTCCGCTTCAATCC CGAGGCGTTCCAGGGCGTGCTGGTCAAGGAGTCCGACCTGGAGAAGACCCGCTACCGCTTCGAACTGGAGGACGGCAGCGTGGTGGAGTTCAAGGGCAAC GAGCAGGTCGAGTACGACGGTGAGATCCATACCGCCGCCAACCTCTTCGACGCCTTGAAAGAAGGCTATTACGGCAAGTACTGAGGCCGGGGGAATCGAT
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| DNA Sequence for Gene |
>NS08_RS21885
ATGTCAGCAGTCAAGATCACGCAGAAGATCAAGGGCTTCAAGGTCGTCAACGAAGCCGAGGAGCAGGCCCTTGCCGCCGCCGCGGAAGCCGCGTCGGTGG TGCAGATGGACGAGACCCTGGAGCGCCCGGATACCCTGATCGGCGCCACCTACAAGATCAAGTCGCCGCTGTTCGAGCACGCGCTCTACGTGACCATCAA CGACATGGTCCTCAATGCGGGCACGGCGCACGAGCAGCGGCGTCCCTTCGAGATCTTCATCAACTCGAAGAACATGGATCATTTCCAGTGGATCGTCGCA CTTACCCGCATCATGTCCGCGGTTTTCCGCAAGGGCGGCGACTGTACCTTCCTTGTCGAGGAACTCAAGGCGGTATTCGACCCGCGCGGGGGCTACCTGA AGAAAGGCGGCATCTACATGCCTTCCATCGTCGCCGAGATCGGCGGCGTGCTGGAGCGCCACCTGACGGCCATCGGCTTGTTGCGTGGCCCTGAACTGGA CGAGGAACAGCGCCTTTTCCTCGCGGAAAAACGCGCCGCCTACGAGGCCGCCCAGGGCACCAGCAAGGTCGAGCCGGGCGAAGGCTTCCCCGCCGGCGCG CAACTGTGCGGCAAGTGCAACAGCATGGCGGTGGTACAGATGGACGGCTGCGCCACCTGCCTCAACTGCGGACACTCGAAATGTGGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCCGTTCAAAACGCATGCGTTTTGAAGGGCGAACGACCGGCCAGGATGGCCGGGCCGGGGGTGGGCTGAACGACGAGGCCTCGACAGGATGTCGGCTCG GCCTCACCCAAGACGCCGAACCGCATGCGTTTTGAAGGGCGAACGACCGGCCAGGATGGCCGGGCCGGGGGTTGGCTGAACGACGAGGCCTCGACAGGAT GTCGGCTCGGCCTCACTCCGAGACGCCGAACCGCATGGTTTTTGAAGGGCGAACGGCCGCAGGACGGCCGTGCTCCTGTGGTTCCTGCCTACAACGCAAA CGGCAAATGAATCTCCACGTTCTGCCGTTGCGCCAGGCGCATCTCGAACTCCGCCGGATCATGGATCAGCACGTCCTGTCCGGCGAACGCCTCGGCGGCG ATCAGTCGCGACAGCCAGAAGCGCACGCAGGCGACCCGCAGCATGCTCGGCCAGTGCTCGGCTTCCAGCGCGGTGAACGGCCGGCGGTTGGCGTAGGCGG
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| Amino Acid Sequence |
>NrdJb
MSAVKITQKIKGFKVVNEAEEQALAAAAEAASVVQMDETLERPDTLIGATYKIKSPLFEHALYVTINDMVLNAGTAHEQRRPFEIFINSKNMDHFQWIVA LTRIMSAVFRKGGDCTFLVEELKAVFDPRGGYLKKGGIYMPSIVAEIGGVLERHLTAIGLLRGPELDEEQRLFLAEKRAAYEAAQGTSKVEPGEGFPAGA QLCGKCNSMAVVQMDGCATCLNCGHSKCG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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