Pseudomonas aeruginosa AZPAE14891, NS08_RS21300
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14891 AZPAE14891_contig_26, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACGGTGCTCGAAGGCAGTTCCGGGTTCGTCTACTACGTGTCGGTGGCCGGCGTCACCGGCGCCAACGCGGCGACCCTGGAGCACGTCGAGGAAGCAGTGG CGCGCCTGCGCCGGCATACCGACCTGCCGATCGGTATCGGCTTCGGCATCCGCAGCGCCGAACACGCCGCCGCGGTCGCGCGGTTGGCCGACGGCGTGGT GGTCGGCTCGGCGCTGATCGACCGGATCGCCAAGGCCCGCGACAATGCCCAGGCGGTCAAGGATGTCCTCGCCCTGTGCGGCGAGCTGGCCGAAGGCGTG CGCAACGCACGCTGACAGACCCTGACAGCGGCATTCGCCAGGCGCAGGCAACCCGCTGCGCCTGGCCTTGCGTTGCACGCTGCCAGAACCGTGAGGAAAA ATTCACGGTCACTTTCAGAAACGTCTTATTGTCCGCCGACTCTGCCGAAGCCTTGAATAGCGCCTCACCCAAATAGCCAACGCATTCAAAGAAGGTTCGC
|
|
| DNA Sequence for Gene |
>NS08_RS21300
ATGAGTAAGGTGCTGATCGTCGATGATCATCCCGCTATCCGCCTGGCCGTGCGCTTGCTGTTCGAGCGCGACGGTTTCACCATCGTCGGCGAGGCCGACA ACGGTGCCGAAGCCCTGCAGGTAGCCCGCAAGAAGTCTCCCGACCTGGCCATCCTGGACATCGGCATCCCCAAGATCGACGGTCTCGAAGTGATAGCCCG CCTGAAGTCCCTGAAGCTGGACACCAAGGTCCTGGTCCTGACCCGGCAGAATCCGGCGCAGTTCGCCCCGCGCTGCCTGCAGGCCGGCGCCATGGGCTTC GTCAGCAAAAGGGAAAACCTCTCCGAGCTGCTGCTCGCCGCCAAGGCCGTGCTGGCCGGCTACATCCACTTCCCCACCGGGGCGTTGCGCAGCATCAACC AGCAGAGCCGCGACAACGAGGCCCGCATGCTGGAAAGCCTTTCCGACCGCGAGATGACCGTGCTGCAGTACCTGGCCAACGGCAACACCAACAAGGCCAT CGCCCAGCAGCTGTTCCTCAGCGAGAAAACCGTGAGCACCTACAAGTCACGCATCATGCTGAAACTCAACGCCCATTCCCTGGCCGGCCTGATCGATTTC GCCCGCCGCCACGAGCTGATCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGATCCCATGCGAACGTTCGACCTGACCGCCGCCCTGGGCGACCGCGCCAACCAACCGGAGATCAGCCGCCTGCTCGTCGCGCAGCTGATGACCAGCAAC AACGAAGACACCCGCAAGCTGCGGCGCGCCCAGGAGCGCGAGCAGACCCAGGAACTCAACGAGCTGGCGCACCGCCTGGCGGGCATGGCCTCGCTGATCC ACGCCCACGCCGTGGAACGCGCCTGCCACCAACTGGAGATCGCCTGCGGCGAAAGCTCCGTGCGCAAGCTCGCCGATGCCGTCGACGACCTGGTGACGGC ACTGGGCGAGCTGCAATGCGAACTGCACGACTGGATGACGATGACCGCGCCTCAAGGCACGGCGAAGTCATAGCGTTGCGGGCCTTCGTCCAGGATCGAC AGGTCCAGCGGGCGAATGGCTCCCATCCAGATGGCTCGGTCGCGATGGTCGAGCAGATCGTTGCCGGTGACCGGGTGGATGAACACCACCAGGTCCTGCC
|
|
| Amino Acid Sequence |
>LuxR family transcriptional regulator
MSKVLIVDDHPAIRLAVRLLFERDGFTIVGEADNGAEALQVARKKSPDLAILDIGIPKIDGLEVIARLKSLKLDTKVLVLTRQNPAQFAPRCLQAGAMGF VSKRENLSELLLAAKAVLAGYIHFPTGALRSINQQSRDNEARMLESLSDREMTVLQYLANGNTNKAIAQQLFLSEKTVSTYKSRIMLKLNAHSLAGLIDF ARRHELI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|