Pseudomonas aeruginosa AZPAE14891, NS08_RS19755
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14891 AZPAE14891_contig_22, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGCAGTTGGCCCCGGAGCCGCTGATCCATGCGCTGCTGCTGCAACTGCTGTACGCGATTCCCAGCGAGCAGCAGTTGTACGAGCAATTGAACTACAACC TGCTGTATCGCTGGTTCGTCGGCCTGGAAATGAAGCAGAAGATCTGGAGTTTTCCGGTTTTCGTCGGCGATATAACCGTCCTGCTGAACAGCGCGGAGGC GGTAAGGATAATAGGCAGGATTATCGGGGAAGTGATTTCCGGGGATCTCATGCAGATGCCGGAGTTCTCCCTGAACTTCGCCTTGTTGCATACATGGCAA GCGCGCCATGGCGGAGCGCGACGGCTGAATATCTAGCGCGAAAGTGAAAATAGAAAAGAACGAAATTTCATAAGGGCGGGGCGCTGTTTTTAACAGGTTG TTCATGCGTCATCGCTAGTTTGTTGTCTTTCATAGAACTGTTCGATGAACGGACTTGTTGCATTAGAACAATAAGTCCCGATGGAACTTCGGGGGACCGT
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| DNA Sequence for Gene |
>NS08_RS19755
GTGAAGCGTTCGCTGTTCAATTGTGCGCACCCGTTTCGCCAGCGCTGGTCGATCGGTTGCCTGGCTGTCGCATTGTCGTGCGCTTCGCTGGCCGACGAGG CCCCTCCCGCCGCGGCGGGAGCCGAGCCCCAGCGTCTGGTGGACATCAACGAGTACGTGGTACGCGGCAACACCGTGCTGGACAACCGCGCCATCGAGGC GGCGGTGTATCCCTTCCTCGGACCGCAGCGCAGCCTGGGCGACATCGAGGGGGCGCGCGATGCGCTGCAGGCCGCCTACCAGGAGAAGGGCTACCAGTCG GTCTACGTCGAGCTGCCGGAGCAGCAGGTGAGCGGCGGGGTGGTCTACCTGCAGGTCACCGAGACCACTGTCGGTCGCGTCCGGGTGGTCGGCGCCAAGC ACTATTCGCCGGTGGAGTTGCGCGAGGAAGTGCCGGCCCTGGAGGAGGGCAAGGTGCCCGACTTCGCCCAGGTCCAGCGCGAGCTGGCGCAGGTCAACCG CACCCCCGGCCGCCAGGTGCTGCCGATGGTGCGCGAGGGCCAGCGGCCCGGCACCATGGACGTCGACCTGCAGGTGGAAGACAAGAATCCCTGGCACGCC AGCATCGGCCTGAACAACGACTACAGCGCCGACACCCGTCACTTGCGCTCGGTGGTTTCGCTGGGCTACGACAACCTCTGGCAACTCGGCCACGCCATCT CGCTGACCTATTTCACCGCGCCGCAGGACCAGGACAACGCCAAGGTCTGGTCCGGCTCCTATACCGCGCCGCTGAGCCAGCGCTGGAGCGTGCAGTTGTC CGGCTACCAGTCCGACAGCGACGTGGCCACGGTGGGCAGCATGAATGTGGTCGGCCAGGGCCACTCCTACGGCGTGGCGGCGATCTACAGCCTGCCGGTC ACCGGCCTCTGGTCGCACTCGTTCTCCTTCGGCGTCGACTTCAAGGACTTCGAGGAACAGACCCGGATCGGCGGCAACAACGACAGGGTGCCGATCAAGT ACGCCCCGCTGACTCTCGGCTACAACGGCTTCCGCTACACCGAACGTTCCCAGTTGGCCCTCGGCCTGAGCCTGGTGGCCGGTACCGGCAGTCTCCTCGG CTACGGCGACGACGACGAGGAATTCGACCGCAAGCGTTATCGTGCCAAGTCCGGCTTCGGCGTGCTCAAGGGCGATCTCAACCACACCCTGACCTTCGGC GGCGACTGGCAGGTGGCGACCAAGGCGGCCTTCCAGCTCGCCTCCGGGCCGCTGATTTCCAACGAACAGTTTGCCGCCGGCGGTGCCACCAGCGTGCGTG GCTACCTGGCGGCGGAGAACACCGCCGACGACGGCTACCTGCTCTCCCAGGAATGGCGTACGCCGTCCCTCGGACGCTTCCTCGGCAAGCGCGCCGGCGG CTACGTCAACGACTGGCGCTTCTACGTGTTCGCCGAGGGCGCGCAACTGCGCCTGCAGGATGCGCTGCCCGAACAGGACGACGACTTCAGCCTGGCCAGC GTCGGCATCGGCACCCGCGCGCAACTCGCCGACTGGCTGTCCGGCAGCCTCGACTGGGCCTTCCCGCTGCTGGAAGGGACGAACACCGACAAACACGACT CGCGCCTGCATTTCAGCGTGCAGGCGAGCTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCTGACCCCGGAGTAACCCCACATGTATCGCTTATTGCTGACATCGCTGATCTGCCTGGGCCTGCTGGCCCCGGCCAGCGCCAGTGCCTGGTGGCAGGA CGACTGGCAGTACCGCAAGCAGGTCTCGGTCGATACCACCCCGCAAGGCGCGGCGATCAACGAGAGTCTCGGTCGCCTGCCGTTGCTGGTGCGCCTGCAT ACCGGCAACTTCACCTTCGACGGGGTCAACGAGAACGGCTCGGACGTCCGCTTCGTCGCCGCCGACGACAAGACCGTGTTGCGCCACCAGGTCGAGAGCT TCGACCCGCTGATGGGCATGGCCCTGATCTGGGTCGACGTGCCGCGGGTGGAGGGTGGCCAGCGCCAGGACATCTGGATGTACTACGGCAACGCCAAGGC GCCGGAGAGCGGCAACGGCCAGTCGGTGTTCGACCCGGACTACACCCTGGTCTATCACTTCGACGGTGCGCCGGGCACTCCGCCGCGGGACTCCACCGCC
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| Amino Acid Sequence |
>membrane protein
MKRSLFNCAHPFRQRWSIGCLAVALSCASLADEAPPAAAGAEPQRLVDINEYVVRGNTVLDNRAIEAAVYPFLGPQRSLGDIEGARDALQAAYQEKGYQS VYVELPEQQVSGGVVYLQVTETTVGRVRVVGAKHYSPVELREEVPALEEGKVPDFAQVQRELAQVNRTPGRQVLPMVREGQRPGTMDVDLQVEDKNPWHA SIGLNNDYSADTRHLRSVVSLGYDNLWQLGHAISLTYFTAPQDQDNAKVWSGSYTAPLSQRWSVQLSGYQSDSDVATVGSMNVVGQGHSYGVAAIYSLPV TGLWSHSFSFGVDFKDFEEQTRIGGNNDRVPIKYAPLTLGYNGFRYTERSQLALGLSLVAGTGSLLGYGDDDEEFDRKRYRAKSGFGVLKGDLNHTLTFG GDWQVATKAAFQLASGPLISNEQFAAGGATSVRGYLAAENTADDGYLLSQEWRTPSLGRFLGKRAGGYVNDWRFYVFAEGAQLRLQDALPEQDDDFSLAS VGIGTRAQLADWLSGSLDWAFPLLEGTNTDKHDSRLHFSVQASF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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