Pseudomonas aeruginosa AZPAE14891, NS08_RS01990
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14891 AZPAE14891_contig_2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGCTCAACCGACGCCTGCCGCGCACCTGGAACAGCGCTCGCCGGGTACGCCTGGGCCTAGCGCTGGCGGCCGCCGGCGCGACAGCGCAGACGCTGTTGG CCGCCGTCGGATACGCCGAAGGCCTGTACTGGGCGCTGCCAGCCCTGCCGATCTTCATCGGCTTCGGCGTGGCGATTCCCAACCTGCTGGGTCCGGCGCT GCACGCCTACGACGATTGCCGGGGACGCGCCGGAGCCCTGTTCGGGCTCGCCTACTACCTGCTGATCGGCCTCGGACTGGGCGCGTCCACCCTGCTACCG TTCGACCGTCCCTGGCCGCTGGCCGCGTACTGGAGCCTGCTGGGCCTGGTCGCACTGCTGCTGGCCAGGCGGCTGCCGGAATGAAAGCGGCGCCAGGTAC GCCCGTGCAAACCGGACGACCGGCCCGGAAAGCCGGATAGGGCGGCCGTCGCGACGCTGCTATGCTGTGATGGCACAGCGCCCATGCGGACCCGCAGAAC
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| DNA Sequence for Gene |
>NS08_RS01990
GTGGCCAGAACGACGCTCGAATCGATCCAGCACGCCATCGAGGTGAATTCGTCCCTGGCCCTTCCCATCGCCCTGGAGAATCTCTCGCGTCTGACCCACC TCGCGCTGCTGACCGTCCCCTTCAACCTGATCCACATCCTGGTGTTTTCCCTCAAGGACTTCCGCCCGGACCTCGGCCATCAGCTCTGGCGCCAGGAAAT CATGTACGCCCATGGCGCCATGGCCCTGCTCTTCGGCGGCATCGGCCTGCTCGCGCTATGGCTGCGCCGCCAGCCGCCCAAGCTGTGGCGCATGCGCCTG CTGATCCTGCTGGGCGGCGCAGGGATCATAGGCTTCGGCGTCGCCATCGCCTGCATCGACCAGCGCATCACCAGCAACATCACGCCGCTGCTGCTGGCCT GTTTCGCCTGCGCCATGTTCATCCTGATCCGCCCGGCCTACGCGGTGCCCTTCTACGGTCTGGCGATGCTGGCCTTCGAGGTGGCGATGGACCACGCCCA GGCCGACCCGCAACTGCGCCTGTCGAACCAGGCCAACGGCCTCACCGCGTTCGGCCTCGGCCTGCTGCTGTCGCTGATCCTCTGGCACGGCCACGTGCGC AACCTGCGCCAGCAACGCAAGCTGGAGTTGCAGCGGCAGGAGCTGGAGGAGAAGAATCGCCAGTTGGAGTACCTGGCCGGTCACGACCCCCTGACCGGCC TGTTCAATCGTCGCGAGTTCGACCAGTTGGTGCTCATGGAGCTCGCGCGCATCGCTCGCCAACCGCAGCCGCTGAGCCTGCTGATGGTCGACCTGGATCA CTTCAAGTACATCAACGACCGCTATGGGCACCCCTTCGGCGACGAGGTCATCCGCCATGCCGCCAACCTGCTGCGCGGCAATACCCGTAGCAGCGACAGC GTGGCGCGCCTGGGCGGGGAAGAATTCCTCCTGCTCCTGCCCGACACCGCCGAGCAGCAGGCTCGCAGCCTTGCGGAAAAACTCCGCGAACGCCTCGAAG GTACCCCGCTGGCGACGCAGGACGGCGTGCTCTGCCTGACCGCCAGCTTCGGCGTGGCCAGCCTCGACGGAGGCGGCCAGGCCAGCTACGAGCAGCTCTA CAGCGCCGCCGACCAGGCTCTCTACCGGGCCAAGAGCAGCGGTCGCAACCGGGTGGAAGTGATTCGCCTGGCCAGCCTCGCGGAAAGCCTGCGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAATTGATCGGCCGGCCCTGACGAGCGGTCGGTCAGCCGCCCGAACCTTGGTTAAGATGGTCCGTGGCGCTCTAGCTCGCCGCTCTTCCTGCCCTTCCGA CCTGCCCGACCTCGCCCGGCCCCATGCCGCGGCCTTGCCGTTGGCGTCGTGCGGGAAGACCGGCGCAGCGCCGTTGTCCGCATTACCAGGGGAGAACCAT GCTCAAGCACCTGCTCGTGCTCACCTGTGCCCTGCTCGCCAGTTCCTCGGCCCTGGCCCAGGTGATGGCCCGCGACCTGGGCGATTTCGAACTCAAGCTG GCCACCAGTCCGACCCGCAGCATGGCCCAGGGCCTGGTCACCCCGGGCAGCTCCGGCAGTTTCCACGGCGGCCTCGACCTAAGCCACGAAAGTGGCTGGT ACATCGGCAACTGGACCTCCAACCTCGACCCCGGCAAGCCCACCGAGATCGACTCCTACGCCGGCTTCAAGCGCCCGCTGAACAACCGCCTGGGCTACGA
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| Amino Acid Sequence |
>diguanylate cyclase
MARTTLESIQHAIEVNSSLALPIALENLSRLTHLALLTVPFNLIHILVFSLKDFRPDLGHQLWRQEIMYAHGAMALLFGGIGLLALWLRRQPPKLWRMRL LILLGGAGIIGFGVAIACIDQRITSNITPLLLACFACAMFILIRPAYAVPFYGLAMLAFEVAMDHAQADPQLRLSNQANGLTAFGLGLLLSLILWHGHVR NLRQQRKLELQRQELEEKNRQLEYLAGHDPLTGLFNRREFDQLVLMELARIARQPQPLSLLMVDLDHFKYINDRYGHPFGDEVIRHAANLLRGNTRSSDS VARLGGEEFLLLLPDTAEQQARSLAEKLRERLEGTPLATQDGVLCLTASFGVASLDGGGQASYEQLYSAADQALYRAKSSGRNRVEVIRLASLAESLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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