Strain | Pseudomonas aeruginosa strain AZPAE14891 AZPAE14891_contig_2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGACCATGTTCGTCATGGCCCCGGTATTCGACAAGATCAACAGCCAGGCCCTGCAGCCCTACCTGAACGAGCAGATTCCCGCCCAGGAAGCCCTGCAAA AGGCCGAGGTACCGCTGAAGGCGTTCATGCTGGCGCAGACTCGCACCTCCGACCTGGAGCTGTTCGTGCGCCTGTCCAAGCGCACCGACATCGGCAGCCC GGAGGCGACGCCGCTGACCATCCTGGTCCCGGCCTTCGTCACGTCCGAGCTGAAGACCGCGTTCCAGATCGGCTTCATGATCTTCATCCCGTTCCTGATC ATCGACCTGGTGGTGTCCAGCGTGCTGATGGCGATGGGCATGATGATGCTGTCGCCGCTGATCATTTCCCTGCCGTTCAAGATCATGCTGTTCGTCCTGG TGGATGGCTGGGCGCTGATCATCGGGACGCTGGCGGGCAGTTTCGGCACCGTCTAGCGGTGCCGCCGGCTTGACGCGCCGCTGGCGCGCTGGAGAGAGAC
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DNA Sequence for Gene |
>NS08_RS00785
ATGACCCCTGAGGTGGCACTCGACCTGTTCCGCGAGGCGTTGTGGCTGACGGCGATGATCGTCGGCGTGCTGGTGGTTCCGAGCCTGCTGGTCGGTCTAG TGGTGGCGATGTTCCAGGCCGCCACCCAGATCAACGAACAGACCCTGAGCTTCCTGCCGCGCCTGATGGTGATCCTGCTCACCCTGATCGTGCTGGGCCC CTGGCTGCTGCGGCAGCTGATGGAATACACCCAGACGCTGATCGGCAACATCCCGCTGCTGATCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCTGGAGCTGACCAACGCACAGATCGGCGGCTGGATCGCCAGCTTCGTGCTGCCGCTGTTCCGGGTCGCGGCGCTGCTGATGACCATGCCGGTGATCGG CACCCAGCTGGTGCCGGTGCGGGTGCGCCTCTACCTGGCGCTGGGCGTCTGCGTGGTGCTGGTGCCGAACCTGCCGCCGATGCCGCAGGTGGACGCGCTG AGCATGAAGGCCATGCTGCTGATCGGCGAGCAGATCCTGGTCGGCGCCTTGCTCGGCTTTTCCCTGCAGTTGCTGTTCCACGCCTTCGTGATCGCCGGGC AGATCATCTCGATGCAGATGGGCCTGGGCTTCGCTTCCATGGTCGACCCGGCCAACGGCGTCTCGGTGCCGGTGCTCGGCCAGTTCTTCACCATGCTGGT GACGCTGCTGTTCCTGGCGATGAACGGCCACCTGGTAGTGTTCGAGGTGATCGCCGAGAGCTTCGTCACCCTGCCGGTGGGCGAGGGCCTGAGCGGCAAC
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Amino Acid Sequence |
>flagellar biosynthesis protein FliQ
MTPEVALDLFREALWLTAMIVGVLVVPSLLVGLVVAMFQAATQINEQTLSFLPRLMVILLTLIVLGPWLLRQLMEYTQTLIGNIPLLIG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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