Pseudomonas aeruginosa AZPAE14891, NS08_RS18430

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14891 AZPAE14891_contig_17, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGCTGGCTTGCGGCGTCCTGCACCTGCAGGCGCTGGGAGTGGGCAGCGACAAAGGGCAGAAGGCCAGCGTCGGGCTGTTCTGCGTCGCCGGTGCCAGCC AATGGCTATCCCTGGATCCCGACGACGGGTCCGCCGGCGATCCGGCACCGGTCAATCCCCAGTTGCCGATGAGCTGCCCGATGTGCAGCGCCCTGGTGCT GTTCGTCGCGCTCGGGGTGATCTGGTCCTGGCGCTTGCAACGGCGACGCCAGGCACGTTTCCGCCCGCCCGCCACGCGCGAGCCGGTGCCGCCCCGGTAC GTCTGGCCGCCGGCCAACCCGCGCGCTTCCCCCGCCTGATCCTGAACGCCCGCCGCGCCGGGCATTTGCATCCGTCGCCCGTCCTGCCTCGTCCGCGCAG CGCTCGCCGCTGTCCATCCGGGCGAGGCGGGCGTGCCCACCATGCCTTGCTTCAGGATCGCTCGATGAAAAAGCACTCCACGGCCCGCCGCGTCCTCGCG
DNA Sequence for Gene
>NS08_RS18430
CTGGGTCTCAACCTCACCCTGGCCGGCGTTCCGGCCTTGCTCTGGGCCGATGAGGAACCCACCGAACTGCCCGCCCTCACCGTCAGCGCCGGCGCCGGCG GGGAAACCCCGCCGGCCCTCGATCTCGACGACAGCGCCGGCGGCGGCTCGCGCCTGGGCCTGAGCCTGCGCGAGACTCCCGGCTCGGTAAGCGTGGCCAA CCGTGCCAGCTTCGAGCGGCGCGGCCTGCGCAGCACCCAGGACATCGCCAACAGCCTGCCCGGCGTGAACGCCTCGGCGCCGCCCGGCTTCGGCGGCTTC GTCACCTACCGCGGCTTCAGCTCGAACCAGGTCAACCAGTTGTTCAACGGCATTCCGGTGCAATACAGCAGCGCCATGCGTCCGCTGGACGACTGGATCG TCGACCGCGTCGAGCTGGTCGGCGGTCCGTCCTCCTTCCTCAACGGCGCCGGTGCCGTCGGCGGCTCGCTGGACTACATCAGCAAGCTCGCCGACCGCTA CGGCGATTTCATGGAAGGCCGGGTGCGCTATGGCAGCTACGACGATTCGGAAGTCGCCTTCGGCTTCAACCAGGCCCTGGGCATCGGCCCCGAGCCGAAG CACTTCGTGCGCCTGGACGTCAGCCGCAGCGGCGGCAACGGCTACGTCGACCGCAATTCGCGCGAATCGTGGAACGTCGCTTTCTCCCTGCTCAGCGACC TGACCCCGGACCTTTCCCACACCCTGGCCCTGGAGTACCAGGACGAGCAGGAAGACAGCCCCTACTGGGGCACGCCGGTGCTCAATCCCTACGCCGGCGA GCTGAAGATCGACAAGAGCCGTCGCCGCGAGAACTACAATGTCGCCGATGGCCGCTACGAACAGCGCGTGCGCTGGCTGCGCTCGATCCTCGAATACCGG GTCAGCGACAGCACGCGCTGGCGCAACACCTTCTACCACTACGACGCCGAGCGCGATTACCGCAACCTCGAGACCTACCGCTACAACGCCGACAACAGCG GGGTGGTGCGCTCCAACGCATTCCTCCAGCGCCACGACCAGCAGCTCAACGGCAACCGCTTCGAGCTACAGCACAGCCAGCCGCTGTTCGGACTGGCCAG CGACTGGGCGCTGGGCTTCGACTACAGCATCAACAAGCAGACGCGCTTCCCGAGTACCGCCTCCGGGCCGTTCGGTACGGTCGATCCGGCCAGTTTCGAG CCGGGCCACTTCTACGACCTGCCGGGCATGCGTCCCGGCCACCGGAAGGACCGCAGCAACGAGGTGCGCACCAGCGCGTTGTTCGCCGAGAACCGCCTGG GCCTGACCGACGAGCTGTCGCTGGTCACCGGGCTGCGCTACGACCACCTCGACCTCGACGTGCGCAACCATCGGACGGTGACCGCCAGCGATCCCGCACA CTTCGAACGGCGCTGGGACGTGGTCACCGGGCGCGCCGGGCTGGTCTACCAGTTCACCCCGCACGCCAACGTCTACCTGCAATACAGTACCGCCGCCGAC CCGCCGGGCGGGGTGCTGACCAGCGCCAGCTTCGGTCAGGTCCGCGACTACGACCTGTCCACCGGCGACCAGTGGGAGCTGGGCAGCAAGTTCGATTTCC TCGACGGTCGCGGCAGCGCCACCCTGGCCGCCTACCGCATCGTCCGCCGGGACTTCTCGGTGGCCGACCCGAACAACCCCAACCTCAGCGTGCCGGTGGG CCAGCAGACCTCCAGGGGCATCGAGGCCGCCGCCTCCCTGCGGATCACCCCGAAGCTGCTGGCCGAGGGCAATTTCGCCTGGGTCGACGCGCAGTACGAC GAGTTCACCGAGAACGTCGGCGGCGTCGCCGTCTCGCGTAAGGGCAAGACGCCGCCGAACGTGCCGGAGCGGGTCGGCAACCTGTGGCTGACCTACGACT TCGACCCGGCCTGGCAGGGCGGGGTGGACGCGCGCTACGTGTCCTCGGTGTACGCCAACAACGCCAACACCTGGCACGTGCCGTCCTACACGGTCTACGG GACTTTCCTCAGCTACCGGCTGGACGAGCGCACGCGGATCACCGGGCGCGTGCGCAACCTCACCGACGAGGTCTACGCGCGCTTCGTGCAGAGCACGCCG CTGTACTACGTCGGCGACCCGCGCACCTTCGAGCTGAGCGTGCAGACGCGCTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGTCGTCGATGAAACGCTACCTGTACCTGTGGCACCGCTGGCTGGGCATCGGCTGCTGCCTGCTGATGGTGCTCTGGTTCGTCTCCGGCATGGTCATG CTGTATGTCGGCTATCCCAAGCTGACTCCGCTGGAACGCCTGGCCCACCTGCCCGAGCTGGACGGCTGCGAGGCCTGCGTACCGCTGCGGACGGCCCTCG CCGGCAGCGATGGAAAGACCCCGCGGAGCATCCGGCTGGCCAGCGTAGGAGGCCTGCCGACCTACCTGCTGGACGATGCCGACGGACGCACGCGTGCGCT GGCGGCGCGCGACGGCCGACCGCTGGCGGTGGACGCGGACAGGGTGCTGGCTTCGGCCCGTGCTTTCAGCGGCGAAGTACCGATGCAGTTGCAAGGGCGG ATCGAGGAAGACGCCTGGACCCATACCCGCAACCTCGATCCGCACCGGCCGCTATGGCGGGTGCAGACCGCGGACGAGCAGGGCCGGCTGCTCTACCTGT
Amino Acid Sequence
>TonB-dependent receptor
MGLNLTLAGVPALLWADEEPTELPALTVSAGAGGETPPALDLDDSAGGGSRLGLSLRETPGSVSVANRASFERRGLRSTQDIANSLPGVNASAPPGFGGF VTYRGFSSNQVNQLFNGIPVQYSSAMRPLDDWIVDRVELVGGPSSFLNGAGAVGGSLDYISKLADRYGDFMEGRVRYGSYDDSEVAFGFNQALGIGPEPK HFVRLDVSRSGGNGYVDRNSRESWNVAFSLLSDLTPDLSHTLALEYQDEQEDSPYWGTPVLNPYAGELKIDKSRRRENYNVADGRYEQRVRWLRSILEYR VSDSTRWRNTFYHYDAERDYRNLETYRYNADNSGVVRSNAFLQRHDQQLNGNRFELQHSQPLFGLASDWALGFDYSINKQTRFPSTASGPFGTVDPASFE PGHFYDLPGMRPGHRKDRSNEVRTSALFAENRLGLTDELSLVTGLRYDHLDLDVRNHRTVTASDPAHFERRWDVVTGRAGLVYQFTPHANVYLQYSTAAD PPGGVLTSASFGQVRDYDLSTGDQWELGSKFDFLDGRGSATLAAYRIVRRDFSVADPNNPNLSVPVGQQTSRGIEAAASLRITPKLLAEGNFAWVDAQYD EFTENVGGVAVSRKGKTPPNVPERVGNLWLTYDFDPAWQGGVDARYVSSVYANNANTWHVPSYTVYGTFLSYRLDERTRITGRVRNLTDEVYARFVQSTP LYYVGDPRTFELSVQTRF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site