Strain | Pseudomonas aeruginosa strain AZPAE14891 AZPAE14891_contig_16, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGTCATCGGCTGCATCATCGCCACCCGCCTGATCAACCGCATCGGCCGGCGCTGCATGCTGCTGCACAGCTTCCTCTGGTCCGGCCTGGCGCTGCTCGGG CTGGGCGTCTTCCACGCCGGCTCGGAGGCGACCATCCTCGGCCTGTTCGGTGCCTACGCGCTGTTCATCGGCGGCGCCCAGGTGCTGCAACTGGTCTACC CGAACGAACTGTTCCCCACCGAGATCCGCGCCTTCGCGGTCGGCGTCGGCACCTCGTTATCGCGCGTCGGCGCCGCGGTGGGCACCTACCTGGTGCCGCT TTCCCTGGAAACCCTGGGTACCGCCCAGACCATGTACGCCGCCGCGCTGGTGACCCTGCTCGGGCTGCTCGTGACCTGGGCCCTGGCGCCGGAAACCCGT TCGCTGAACCTGCAGCAGGCGGCTTCGCTCACCTGAACCACCCGCCGCGGCAGCGTCCGCCGGGTGCGCCGCGGCCCAGCATCCCACAGGAGGAAACCCC
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DNA Sequence for Gene |
>NS08_RS17935
GTGAAATTCGAAGGTATCTATACCCCCGCCATCACCCCGCTGAGCGCCGACGGCAGCATCGACACCCAAGCCTTCGCCGAGGTCCTGGAGTTTCTCGTCG AGTCGAAGGTGCACGGCATCGTGATCGGCGGCTCCACCGGCGAGTACTACGCGCACACCGCCGAGGAACGCCTGGCCCTCGCCGCCCACGCCAGCGAAGT CATCGCCGGGCGCCTGCCGCTGGTGGTGGGAACCGGCGCGATCCGCACCGAGGACTCGCTGGCCTACGCCGAAGCCGCCCGCGCCATCGGCGCCGACGCC ATCCTGGTCGGCTCGCCGCCCTACGCGCTGCCGACCTCGCGGGAGATCGCCGAGCACGTGCTGGCGGTGGATCGCGCCGCCGGCCTGCCGATCATGCTCT ACAACTATCCGGCGCGGATGGGCGTGGAGATGGACGAGGCGTTCTTCGCCGCCGTCGCCGGCTGCCGCAACATCGTCGCGATCAAGGAAAGCTCCGGCTC CACCGCGCAATTGCACCGCCTGGCCTGCCGCCACCCGCGGATCGCCTTGTCCTGCGGCTGGGACGACCAGGCCCTGGAGTTCTTCGCCTGGGGCGCGCGC AGTTGGGTCTGCGCCGGCTCCAACTTCATCCCTGGCGAACACCTCGCCCTGTACCAGGCCTGCGTGGTCGAGAACGACTTCGCCAAGGGCCGGCGCATCA TGGCGGCGATGATGCCGCTGATGGACTTTCTCGAAAGCGGTCACTTCGTCCAGTCGATCAAGCACGGCTGCGAGCTGGCCGGCCTGCGCGCCGGCGGCGT ACGTGCGCCGCTGAAGGCGCTGGACGAGGCCGGCAAGGCGGCACTGGCGGAGATCGTCGCCAGGCTCAAGGGCGAGGTCGCGCGGATCGTCGAGGGTGGC CGCCATGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCTGCTGAGCCGGGAGGAATACGCGGCCATCGCCGCGACGCTGGACCTTCCCCAGCGCGCCTTCATCGACGGAGGGTTCCGCGATGCCTGCGGCGGCCGC ACCTTCGCCTCGACCAACCCGGCCACCGGCGAGCTGCTGGCGCAGGTCGCCGCCTGCGACGCGGAGGACGTCGGGCACGCCGTGGCCAGCGCGCGGCGGG CGTTCGAGGACGGCCGCTGGCGCTCGCGCACGCCCGCCGAGCGCAAGGCGGCGCTGCTGCGCCTAGCCGAGCTGCTGGAAGAGCACCTGCTGGAACTGGC GGTGATGGAGAGCCTCGACAGCGGCAAGCCGATCCGCGAATGCCAGCACACCGACCTGCCGGAAACCATCAATACCCTGCGCTGGCATGCCGAACTGATC GACAAGATCTACGACAGCACCGCCCCGGTCGGTTCAGCGGCGCTGGCCATGGTGGTGCGCGAGCCGATCGGCGTGGTCGGCCTGGTGCTGCCGTGGAACT
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Amino Acid Sequence |
>dihydrodipicolinate synthetase
MKFEGIYTPAITPLSADGSIDTQAFAEVLEFLVESKVHGIVIGGSTGEYYAHTAEERLALAAHASEVIAGRLPLVVGTGAIRTEDSLAYAEAARAIGADA ILVGSPPYALPTSREIAEHVLAVDRAAGLPIMLYNYPARMGVEMDEAFFAAVAGCRNIVAIKESSGSTAQLHRLACRHPRIALSCGWDDQALEFFAWGAR SWVCAGSNFIPGEHLALYQACVVENDFAKGRRIMAAMMPLMDFLESGHFVQSIKHGCELAGLRAGGVRAPLKALDEAGKAALAEIVARLKGEVARIVEGG RHD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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