Strain | Pseudomonas aeruginosa strain AZPAE14891 AZPAE14891_contig_16, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACGCCCTGCGCCTCCAGCTCCGCACGGTATGGCGCGGCGCTGTCGGCGCCGGTGGCGGAGGCGACCAGCAGGTCCGGATCCTGGGCGATCACCGCTTCGA TGTCGAAGCGCAGGTTGCGGTAGAGCACCTCGACGCCACGTTGGTCGGCGACCTTCGCCCATTGCGAGAAGAAGCCCTTGGCGTCGGTCAGGCGACTTGG CGTGGTGGCGGCGCTGGCCACCAGCGGTGCGTCCATCGCCAGCAGGATGCCGGTGACGCTCGGGGTGGTGGAGACGATCCGCGCCGGCTTCGGCTCCCCG GCCGCGGCGAGGGTGGCGAACAGGCTCAGGGCGAGGGCGAGTAACGGCAGGGCGGAGCGGCGGCGGGTCGGCATGAAGGCTGTTTTCGCTGTAGGGGACG CCGGGCGGACGGATTCATATGATAATGCTTCTCATACAGTCTATTCCATAATGTAGAATCGATTCCACATATTCGAGCCATTCTTATCCAGGAACCTCCC
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DNA Sequence for Gene |
>NS08_RS17785
|fecE
ATGACCCATCGCCTGCACGCGGACGCCGTGACCTTGCGCCGCGACGCGCGGACCGTTTCGCGGAATCTCTCGCTGGCCATCCCCGAGGGTTCGTTCAGTG TGATCGTCGGGCCCAACGCCTGCGGCAAGTCGACCCTGCTGGCGGCATTGTCGCGCCTGTTGGCGCCGGCCGAGGGCCGGGTGGTGCTGGACGGCAGGGA TATCCACAGCCTGCCGGGACGGGAAGTGGCGCGGCGTCTCGGCCTGCTGCCGCAGAGCGCGCTGGCGCCGGATGGCATCACGGTGGCCGAGCTGGTGGCG CGCGGGCGCTATCCGCACCAGTCGTTCCTGCGCCAGTGGTCGCCGGCGGATGAGCGCGCGGTAGCGGCGGCGTTACGCGCCACGCGGGTCGACGGCCTGG CCGAGCGACCGCTCGATGCGCTCTCCGGCGGCCAGCGGCAACGCGTGTGGATCGCCATGGTGCTGGCGCAGGAAACCCCGTTGCTGCTGCTCGACGAGCC AACCACCTACCTGGATATCGTCCACCAGATCGAATTGCTCGAACTGCTCGCCGAGCTGAATCGCCAGGGGCGCACCATCGTCGCCGTGCTGCACGACCTC AACCAGGCCTGCCGCTATGCCTCGCACCTGATCGCCATGCGTGACGGCGCGATCCTCGCCGAGGGCGCGCCGGCGCATATCTTCACCGAGCGTCTGGTGG AGGAGGTGTTCGGCTTGCGCTCGTTGATCATCGCCGACCCGGTCAGCGGCACGCCGCTGCTGGTGCCGCGCGGGATCGCCGCCGACGCGCCGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGTGGCTCAGCGCGGCGGCGGCCGCATGCCGGGGTGGAGGACCAGGCCACCGGTGGACTGGTTGACCTGCAGCGCCTCGTGGAACAGCGCGTCGCGGTCT TCCGCCGACTGCAACTGGCCGAGATCGGCCACCGTGGTCATGGCGCAGACGATCTCCTGCTGGGCGTCGAACACCGGCGCCGCCTGGCCGGTGACATTCG ACAGCAGGTGGCTGGTCAGTTCGGCCCAGCAGCGCTCACGCACCTCGTCGAGCAGCGCGCGGCTCGGCGGGCTGCCGCGGAAGTGCGCCGGTTGCTGCTT GCGCGCGGCGTCGACCACGGCCTTCGGCAGGAAGGCCTGGAACACCAGGCCGCAAGCGGTATTGTCGATGGGCAGGATATCGCCCAGGGCCAGCGGGTTG ATCGAGAAATAGGCGCTGCGGTACCAGCGCACCAGGGTCGGGCCGCGCTCGGTCCAGATCGCCACCCCGCCGCTGGCGGCATGCCGTTGGGCCAGGGCCT
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Amino Acid Sequence |
>ABC transporter
MTHRLHADAVTLRRDARTVSRNLSLAIPEGSFSVIVGPNACGKSTLLAALSRLLAPAEGRVVLDGRDIHSLPGREVARRLGLLPQSALAPDGITVAELVA RGRYPHQSFLRQWSPADERAVAAALRATRVDGLAERPLDALSGGQRQRVWIAMVLAQETPLLLLDEPTTYLDIVHQIELLELLAELNRQGRTIVAVLHDL NQACRYASHLIAMRDGAILAEGAPAHIFTERLVEEVFGLRSLIIADPVSGTPLLVPRGIAADAPG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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