Pseudomonas aeruginosa AZPAE14891, NS08_RS11745
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14891 AZPAE14891_contig_10, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCGCTGCTCTACGGCGAAATGGCCAAGGCCAAGAAGCCGGACGACTGGGTCGTCGGCGGCACCCCGCAGTCCTTCGAGATCTACGGCTGCATGGTGCGC AAGGGCGACGCGGCGTTCAAGAAAGTGGTCGACAAGGCCATCACCGATACCTACGCCTCCGGCGAGGTCAACAAGATCTACGACAAGTGGTTCACCCAGC CGATCCCGCCGAAGGGCCTGAACCTCAACTTCCCCATGAGCGAAGAGCTGAAGAAGCTGATCGCCAGCCCGACCGACAAGGCCGCCGAGCAGATGTAACG AGCGCCTGGCGTTCCTCCCGGAGCGCCAGCGCTTCGCGCGTCGCCCCCGCCTCGCAGCGGGGCCTCGGGGACGCGGGAGGGGCCTGCCCCTCCCCAGCCG TCTCCCCCGGAAGAGCAGCGCCGCCGGCCCGCACGGCCGCGCCGGCGCCTGCCTTCCCCGCCAGTGTCTGCAACCGATTGAACCGAGGGGAAACCCCAAC
|
|
| DNA Sequence for Gene |
>NS08_RS11745
ATGAATTACAACTGGGACTGGGGCGTGTTCTTCAAGTCCACCGGGATCGGCAGCGAAACCTACCTCGACTGGTACATCGCCGGTCTGGGCTGGACCATCG CCATCGCCCTGGTCGGCTGGATCATCGCCCTGGCGCTGGGCTCGCTGCTCGGCGTCATGCGCACCGTGCCGAACCGCCTGGTATCGGGGATCGCCACCAC CTACGTGGAAATCTTCCGCAACGTGCCGCTGCTGGTGCAGCTGTTCATCTGGTACTTCCTGGTACCCGACCTGCTGCCCGAGGGCCTGCAGACCTGGTTC AAGCAGGACCTCAACCCGACTACCTCGGCCTACCTCAGCGTGGTCGTCTGCCTCGGCCTGTTCACCGCCGCGCGGGTCTGCGAGCAGGTGCGCACCGGCA TCCAGGCGCTGCCCTACGGGCAGACCTCGGCGGCCCGCGCGATGGGCTTCCGCCTGCCGCAGATCTACCGCCACGTGCTGCTGCCGCAGGCCTTCCGGAT CATCATCCCGCCGCTGACCTCGGAGTTCCTCAACATCTTCAAGAACTCCTCGGTGGCGTCGCTGATCGGCCTGATGGAGCTGCTGGCGCAGACCAAGCAG ACCGCCGAGTTCTCCGCCAACCTGTTCGAGGCCTTCACCCTGGCCACGCTGATCTACTTCACGCTGAACATGAGCCTGATGCTGATCATGCGCCTGGTGG AGAGAAAGGTCGCCGTACCGGGCCTGATCTCCGTAGGAGGTAAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGGACTTCAGTGGAATCGTTCCCGCCCTGCCGAGCCTCTGGGAAGGCATGCTGATGACCCTCAAGCTGATGGTCCTCGGCGTCCTCGGCGGCGTCGCGCT GGGTACCGTGCTGGCGCTGATGCGGCTGTCGCACAGCAAGTTGCTGTCGAACATCGCCGGCTTCTACGTCAACTACTTCCGCTCGATCCCGCTGCTGCTG GTGATCACCTGGTTCTACTTCGCGGTGCCCTTCATCCTGCGCTGGATCACCGGCGAGGACACCCCGGTGGGGGCGTTCACCTCCTGCCTGGTGGCCTTCA TGATGTTCGAGGCGGCCTACTACTGCGAGATCGTCCGCGCCGGCATCCAGGCCATCCCGAAAGGCCAGATGGGCGCCGCCCAGGCACTGGGCATGACCTA CGGGCAGACCATGCGCCTGGTGATCCTGCCGCAGGCGTTCCGCAAGATGACCCCGCTGCTGCTGCAACAGAGCATCATCCTGTTCCAGGACACCTCGCTG
|
|
| Amino Acid Sequence |
>amino acid ABC transporter permease
MNYNWDWGVFFKSTGIGSETYLDWYIAGLGWTIAIALVGWIIALALGSLLGVMRTVPNRLVSGIATTYVEIFRNVPLLVQLFIWYFLVPDLLPEGLQTWF KQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQALPYGQTSAARAMGFRLPQIYRHVLLPQAFRIIIPPLTSEFLNIFKNSSVASLIGLMELLAQTKQ TAEFSANLFEAFTLATLIYFTLNMSLMLIMRLVERKVAVPGLISVGGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|