Strain | Pseudomonas aeruginosa strain AZPAE15025 AZPAE15025_contig_9, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCGCCGGCGAGAGTCTCGAAGACGGACTGCTGGACCTGCGCCTGGGCGCCGACGGCAACTACTTCGACCTGCTGATGACCGCGGCGCCGGGTAGTGCCT CGCCGACCTTCCTCGATGAGAACGTCCTGCGCGAGGGCGGGGGCGAGTTCCTCATGCGCGGCCGGCCGATGTTCGAGCATGCCAGCCAGACCCTGGTACG GATCGCCGGCGAAATGCTCGTGGCCCATGAGCTGACCTTGGACGACATCGACCATGTGATCTGCCATCAACCGAACCTGCGCATCCTCGATGCGGTGCAG GAGCAACTGGGCATTCCCCAGCACAAGTTCGCGGTGACCGTGGATCGTCTGGGCAACATGGCTTCGGCCTCGACCCCGGTCACGCTGGCGATGTTCTGGC CGGACATCCAGCCCGGACAGCGGGTGCTGGTCCTGACCTACGGTTCCGGCGCGACCTGGGGCGCGGCGCTGTACCGTAAACCTGAGGAGGTGAACCGGCC
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DNA Sequence for Gene |
>NT41_RS08980
ATGTTGAGGCTTTCGGCTCCCGGTCAACTGGATGATGACCTGTGCCTGTTGGGGGACGTCCAGGTGCCGGTGTTTCTGCTGCGTCTCGGTGAGGCGAGCT GGGCGCTGGTTGAAGGAGGGATCAGCCGGGATGCCGAATTGGTTTGGGCGGACCTGTGCCGCTGGGTCGCCGATCCGTCCCAGGTGCACTACTGGCTGAT CACCCACAAGCACTACGACCACTGCGGCCTGCTGCCCTACCTGTGTCCGCGGCTGCCGAACGTACAGGTCCTGGCGTCCGAGCGGACCTGCCAGGCCTGG AAGTCGGAAAGCGCGGTGCGGGTGGTCGAGCGCTTGAACCGGCAACTGTTGCGTGCGGAGCAGCGGTTGCCCGAGGCCTGTGCCTGGGACGCTCTGCCGG TTCGCGCGGTGGCCGACGGCGAGTGGCTGGAGCTGGGACCGCGGCATCGCCTGCAGGTCATAGAGGCCCACGGCCACAGCGACGATCACGTGGTTTTCTA CGACGTGCGACGCCGACGCCTGTTCTGCGGCGATGCCCTGGGCGAGTTCGACGAGGCAGAGGGGGTGTGGCGGCCGCTGGTGTTCGACGACATGGAGGCT TACCTGGAGTCCCTGGAACGTCTGCAGCGTCTGCCGACCCTGCTGCAACTGATCCCGGGACACGGCGGCCTGCTGCGGGGGCGGCTGGCCGCGGATGGGG CCGAGTCGGCCTATACCGAGTGTCTGCGCCTGTGCCGGCGGTTGCTCTGGCGCCAGTCCATGGGCGAGTCCCTCGACGAACTGAGCGAGGAGCTGCACCG CGCCTGGGGTGGGCAGAGCGTCGACTTCCTGCCCGGCGAACTGCACCTGGGGAGCATGCGCCGGATGCTGGAGATTCTCTCCCGCCAGGCGCTGCCTCTG GACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGGGACATCCATTGCGGCGATCGCCGCCGACGGCAGCGGTCGCAATTGGGGGAAAAGGGGGTTATCGATGATGAACATGCCGTTGCGCGCTAGCGTCG CGCAGGCCAGTCGCCCATGGGCGCGGGGAGATGGCTCGTGAGCGGGGTTGGCTATCGACTGGAAGAAAGTCTGGAGTACCGCACGCTGGTGCCGGAGGCG CTGTCGATCTGGCGCATGGCCGGCGCCAACCGGATGCTGTTCGACTGCTTCGACGTGGACAGCAAGGCTGCGCGGCGTAGCGTGGCGATCCTTTCCAGCT GCCTGCGCATCGAGTGCTGGGGGCGCGATGTAGTGCTGCGGGCGTTGAACGCCAATGGACGCGCCTTGCTGGCACCGTTGAGCGAGGCCTGTCCGGCCCA GGTCACCTGCTTGCGTGACGGCGACACCCTGCACTGGCGCTTCCCCCAGGAAGAGTCGCAGGCGGACGAGTGGCGACGCCTGCATGGCCTGTCCAGCCTG
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Amino Acid Sequence |
>hypothetical protein
MLRLSAPGQLDDDLCLLGDVQVPVFLLRLGEASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQAW KSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDVRRRRLFCGDALGEFDEAEGVWRPLVFDDMEA YLESLERLQRLPTLLQLIPGHGGLLRGRLAADGAESAYTECLRLCRRLLWRQSMGESLDELSEELHRAWGGQSVDFLPGELHLGSMRRMLEILSRQALPL D
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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