Pseudomonas aeruginosa AZPAE15025, NT41_RS19960
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE15025 AZPAE15025_contig_21, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTGCGCCGCGAGGAACCCGGCACGCGCCTCACCGTGTTGCAGTCGGCGGTGGCCGCGCGCGCGGAAACGCTCAGCGAAGAGCGTGTGATCAAGGAAGGC CAGCAGGTGCTGATCCTGCCGCAAGGCCTGCGGGCCAGCGAAGCGGCCCCGGCCCTGGCCGGCGCCTGGGCACAAGGCATGCTGGTGGTGGAGAACGCCC GGCTGGCCGACCTGGTGGCGGAACTGGGGCGCTATTCGCCGGCGCTGCTGCGGGTCGACCCGAGCATCGCCGACCTGCGCGTCACCGGCAGTTTCCCGCT GAAGGACACCCGCCTCGCCCTTCAGGCTTTGGAGCCGAGCCTGCCGGTGCGCAGCGTGAGGCACAACGCCTGGTGGTTCGAAGTGGTGCCACGCTGAACC GAACGGGCCGGCGAAAAATTTTTCCCGCCGGCCCTATCACTTTTTCCGACTCGTCCGGCAAGGAGGCATTGAGACTCGTTTCCATCCAGGAGCCCCGCAC
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| DNA Sequence for Gene |
>NT41_RS19960
ATGCCCCGCCCGACGTTCCGTCCCGGCCTGCTCGCCCTCGCCATCGCCCTCGCCGTTCCCGCACCGTTCCTCCACGCCGCCCCGGCCGAACAGGCCAGCG TGCGCGACTACCGCATCGCCGCCGGGCCGCTGGCAGGCACCCTGAACCGCATCGCGGCCCAGGCCGGCCTGGTCCTCACCCTGGACCCGGCGCTCGCCGA AGGACGCAGCGCCCACGCCGTACAAGGTCGCTTCGACGCGCCCGGCGCATTGCGCGAAGCGCTCAAGGGCAGCGGCCTGGAGCTGGTGGAAAATGCCGGC GGCACCTACAGCCTGCGCAAGGTGCCGGAAGACACCCTGTCGTTGCAGGCGATGACGGTCAGCGGCGCCGAGGAAGACCCACTGGGGCCGACCAGCGGCT ACGTGGCCAAGCGCAGCATGACCGGGACCAAGACCGATACGCCGATCCTCGAGACCCCGCGCTCGATCTCGGTGGCGACCCGCCAGCAGATGACCGACCG CGCCGTGCACAACCTCGACGACGCGGTGCGCTACATGCCCGGCGTCGTCGCCAGCAGCTTCGGCAGCGACACCCGCTCCGACTGGTTGAAGGTGCGCGGC TTCAAGCCGACCCAGTTCCTCGACGGCCTGCCGATGGCGGTCGGCGTCTACAACAACCCGAAGCTGGAAACCTGGAACCTGGAGCGTGTCGCCCTGTTGC GCGGCCCGGCCTCCTCGGTCTACGGCCAGACCCCGCCCGGCGGCATGCTCGACATGGTCAGCCTGCGTCCGCAGAACGTCACCAGTCACGAGGTGAAGGC CGAGGTCGGCAACTACAACCACAAGCAGGTCAGCTTCGACAGCACCGGCCCGCTCGACGACGAGGGACGCTTTCTCTATCGCATCTCCGGCGTGGTGCGC GACAGCAACACCCAGGTCGACCATATCGACGACAAGCGCTACAACATCGCCCCGAGCCTGACCTGGAACATCGACGACGACACCAGGCTGACCTTCCTCG GCCAGTTCAACCGCGACGATACCGGCATCACCAGCCAGTTCCTGCCGCTGCGCGGAACCAAGTACGACGCGCCGTTCGGCAAGGTTTCCCACCACAAGAA CCTCGGCGACCCGGACTGGGAATACTACGACCGCACCTACTACTGGCTGGGCTACGCCTTCGAGCGGCGGATCAACGATGTCTGGCAGTTCCGCCAGAAC CTGCGTTACCTGCGCAACGACCTGTCGTTCCAGGCGGTTACAGCGGGCACAGCTCATGCCGACGGCACACTGGAACGCAGCACCACCTCGGTGGATGAAG ACGTCAGTCAGTTCGTAGTAGATAACAACTTCCAGGCCGACTTCGAAACAGGCGCCCTGCGCCACACCCTGCTGCTAGGCCTGGATCACAACCGCACCGA CAATCAATACACATCAATCTTTGGCAGCGCGCCGCCGAGCAACGTCAACAACCCGATCTACGGCCAGCCGATCGTCAAACCGGATCGTTCGACGGCCTTC TACGACTACAAGCAGAAGACCTACCAGACCGGCCTCTACGTCCAGGACCAGATCGCCCTCGACAACTGGCGCCTGACCCTCGGCGGTCGCGAGGACTGGG TGCACACCGGGGCCACCTTCTACAACAAGGGCGACGCCACCAATACCAGCCGCGACAAGAAGTTCAGCGGCAACGCGGCGCTCAGCTACATCTTCGACAA TGGCGTGGCGCCCTACATCTCCTATGCGGAGTCGTTCCAGCCCACCACTGGCGCCGATATGAACAGCACCAGTTCGCTGAAGCCGACCGAAGGCAAGCAA TGGGAAATCGGTGTGAAGTACCAGCCGGTGGGCTCCGACTCGCTGTTCACCGCCGCGGTCTATGACCTGCGCCAGGAGAACGTCAGCGTGTCGCAGAACA TAGGCGGCACGCCGGTCACTTCGCAGACGGGCGAAGTGAAGGTCTCCGGGATAGAGCTGGAAGCCACCAGCAACGTCACCGACAACCTGAAGTTGATCGG CGCCTATAGCTACGCCGACACCGAAGTGAAAAAAGGCCAGTACGCAGGCAACCGCCTGCAACAGGCGCCGCGCAACCAGGCCTCGCTATGGGCCGACTAC ACCTGGCACGAGGGTGCGCTGAACGGTTTCAGCGTGGGTGCCGGCGCCCGCTACGTAGGCTCGACCTACGGCGACCAGGCCAACACCTACGACGGCTACG CCGGCTCGTACACCCTGTACGACGCCGCCGTGCGCTACGACCTGGGCCAATTGAACGGCAGCCTGAAAGGCGTCAGCGTGGCGGTCAATGCCAACAATCT GTTCAACAAGGACTACCTGGCGTCCTGCGACGGCTACTACTGCTACTACGGCGACCAGCGCAGCGTGGTGGGCAGCGTCAGCTACAAGTGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGACGCGTCACAGGTGCGCAACGGCGGATAACCGCTTCGCGGTTATCCGCCCTACCGCAGAACGTACCTTCCGGGCACCGGATGCCCTCCTCCCGCCTG TGGGAGAGGGCCGGGATATCGGTAGCCGGCGCATCGGGGAGGACCTGCATTCCGGGCGCCGGAGATCGTCGTTCACCCCGCGATCCGACCCCACAGCGCG CTGGCGTCGTCGTGGATCTTGAAACGCGGGAAAGCCAGGGCCTGGTCGTCGCCCTGTTCGATCTCGCGCAACTCGTCGAGCATGGCGCTCACTCCGACGT CCTCGAGGCGCCGCAGCAACTGTTCGTCGGTATAGCGGCGGAAAGGCTCGACCAGCCGGTCGAAGCCGTCGGTCATCAGCACGAAGGAACGCAACGCGGC GAGCGGCAAGGTCTCGCGCTGCACCTGGCCGAGCCAGCGGTCGCTGATGTCCAGCGCCCAGTAGCCCTCGGGCTTGTTCATCAGCAGGCGGTTCTGCCGC
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| Amino Acid Sequence |
>TonB-denpendent receptor
MPRPTFRPGLLALAIALAVPAPFLHAAPAEQASVRDYRIAAGPLAGTLNRIAAQAGLVLTLDPALAEGRSAHAVQGRFDAPGALREALKGSGLELVENAG GTYSLRKVPEDTLSLQAMTVSGAEEDPLGPTSGYVAKRSMTGTKTDTPILETPRSISVATRQQMTDRAVHNLDDAVRYMPGVVASSFGSDTRSDWLKVRG FKPTQFLDGLPMAVGVYNNPKLETWNLERVALLRGPASSVYGQTPPGGMLDMVSLRPQNVTSHEVKAEVGNYNHKQVSFDSTGPLDDEGRFLYRISGVVR DSNTQVDHIDDKRYNIAPSLTWNIDDDTRLTFLGQFNRDDTGITSQFLPLRGTKYDAPFGKVSHHKNLGDPDWEYYDRTYYWLGYAFERRINDVWQFRQN LRYLRNDLSFQAVTAGTAHADGTLERSTTSVDEDVSQFVVDNNFQADFETGALRHTLLLGLDHNRTDNQYTSIFGSAPPSNVNNPIYGQPIVKPDRSTAF YDYKQKTYQTGLYVQDQIALDNWRLTLGGREDWVHTGATFYNKGDATNTSRDKKFSGNAALSYIFDNGVAPYISYAESFQPTTGADMNSTSSLKPTEGKQ WEIGVKYQPVGSDSLFTAAVYDLRQENVSVSQNIGGTPVTSQTGEVKVSGIELEATSNVTDNLKLIGAYSYADTEVKKGQYAGNRLQQAPRNQASLWADY TWHEGALNGFSVGAGARYVGSTYGDQANTYDGYAGSYTLYDAAVRYDLGQLNGSLKGVSVAVNANNLFNKDYLASCDGYYCYYGDQRSVVGSVSYKW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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