Pseudomonas aeruginosa AZPAE15025, NT41_RS10645

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE15025 AZPAE15025_contig_12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGTCCTCCCACTGGTCGTGGGCGCGTACCCGGCGTACCTGTTCGGGCGTGCGCAGGCGTTGCGCCTCCAGCACCGCGCCGAGATCGGCGACGGCCGCAGC CGAGTTCGCCGCCGGCGGCGGCGGAAGGTAGTCGGCCAGGCGCGGTGGGTGGGCCAGCGGATAGGGCGCGGCGGCGGTCTCCCCGAGACAAGACAGCGGT GCGAGCAGCGAAAGGCAGAGCAAGAGCGAAGGGCATAGGGTCTTGTTGTTCATGAAGCGTATTCCCTGAGGCGAGGTTGCATCGGGAGCCTAGGCTCCCG CCCACGGCCGTTGCGGATGACGGCCGACGCCACACTCTCCGTCGGTGACTTCCGAAATGCTTGACCCGGCCTGCCGTTGCACATGCCAGCCCCTGCCAAT GGCAGGCCCCGGCAAAAGCCGAGGCAGGGAAACACAAGCGGCCTGCGGAGCGACTTCCGAGACTGCGCCCACCTGGCACTCAGGTGGGAGAAAACAATAA
DNA Sequence for Gene
>NT41_RS10645
ATGCAAAATCTCAGACGCGCTGTATTCGCCGGCCTGGTCGCCGGCACGCTTTCCGAAGGGGCGGCCGCGACGGCCGGGGATGGGGGCTTCGTCGAGGACA GCGAACTGCAGTTCCTCGCCCGCACCTACTACTTCAACCGCGACTACCGCGACAGCCCGAACAACGCCGGGCGCAACCGCTTCAAGCCCAGGAGCGAGCG CAACGGCTACCGCGAGGAAACCACCCAGGGCCTGCGCCTCCAGTTCGCCTCCGGCTACACGCCGGGCAGCCTCGGCTTCGGCCTCGACGCCCATGCCATG CTCGGCCTGCAACTGGACAGCGGCGGCGGCCGCACCGGCACCGGCAACCTGCCGGTCGGCGCCGACGGCCATCCCGACCATCGCTACGGCAAGGTCGGCG GCGCCCTCAGGCTACGCCACGGCGAAACCCGCCTGAAGTACGGCCAGACCACCACCAGCGCGCCGGTGTTCGCCGCCAGCAGCAACCGCACGCTGTCCGG CATGGCCTACGGCCTGCTGCTGGAGGATCGCTCGTTCGACGGGCTGCTGCTCGAGGGCGGGCGCTTCACCGCCGCCTCCGGCCCCGGCGAATCCAAGGTC CGTGGCGACATCAGCACCGTCTACGGACGCCTCGGCGCCTATCCGGTGCGCCTCGACGCGGTCGGCTTCCTCGGCGGTCAATGGCAGGCCACGGAGCGGC TGCAACTGTCGCTCTACGCCTCGCGCTTCGACGACATCTGGCAGCAGGCCTATTTCGGCGCCAGCCATCGCCAGCCGCTGGGCGGGGAGCGCGCGCTGCG GGTCGACCTCGACGCCTACCGCACCCGCGACAGCGGCCAGAGCCGCTTCGGCCGCATCGACACCCTGGCCAGCTCCCTGGCCCTGGGCTACGAACAGGGA CCGCAGCGCATCACCCTGGCCTACCAGCGTGTCCACGGCGAGCAGCCGTTCGACTACATGGCCTTCGGCGACGGGCGCTCCAGCGCATCCATGGTACTGG CCAACTCGGTGGGCTACTCCGACTTCAACGGACCGGGCGAGCGTTCCTGGCAATTACGCTATGACCTGGACCTCGGCGCGCTCGGCCTGCCTGGGCTCAG CCTGCACGCGCTGCATGCCCGCGGCCGTGCCGGGGCCAGCGCCAGCAGCGCCGCCGAGAGCATCTACGCCGGACTCTACGGGCGTGACGGGCGGCACCGG GAAAGCGACCTCGGCTTCGCCTACCGGGTCAAGGCGGGCCCCCTCGCCGGCCTCGCGCTGCGCACCTCGCAGGCCTGGCACCGGGGCAACGCGAGCTATC TCGACGGCGACATCGACGAAACCCGGCTGGTCGTCGATTACTCCCGCTCGATCTGGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCCCCGGGCCGCGGCTCGGCGTCACTCCGCCGCCTGCGCCACGGCCTTGGCCTTCGCCAGCTTGCCGGCCGCCTCCAGCAGTTCCGGCGCGGCCCACTG CTCGGCGCTGAATTCGCGACGGATCAGGCCGAAACGCTTGGCCGCCTGGATCGAAGCATCCAGCCGGCCAAGGAAATCGGCGTCCAGGCGCGGCGACAGG GCGTCGCCCAGCTTGCGGCCACGGTACTCGCTCTGCAGGATCACCACCGGGTAGCTGGCCTGCTTCGACACCAGTTCGATGTAGGCGTCGCGGTTCTCCT CGCGGGCCAGCCAGTCCTGGGCCTGCAACTGCACCTTGAGCAGCCGCTCGGTGATGTCCGGATGGGCATCGACGAAAGCCCCGGAGCCGACCAGCAGCGC CTGCAGGGTGCCGGCGCCGTTCAAGTCGCGGGTGCTCAGCGGAATTTCCGCGAGCCCGCGGTCGCGCAGGGCGAACAGTCCGGCCAGGCCCCAGGTGGCA
Amino Acid Sequence
>porin
MQNLRRAVFAGLVAGTLSEGAAATAGDGGFVEDSELQFLARTYYFNRDYRDSPNNAGRNRFKPRSERNGYREETTQGLRLQFASGYTPGSLGFGLDAHAM LGLQLDSGGGRTGTGNLPVGADGHPDHRYGKVGGALRLRHGETRLKYGQTTTSAPVFAASSNRTLSGMAYGLLLEDRSFDGLLLEGGRFTAASGPGESKV RGDISTVYGRLGAYPVRLDAVGFLGGQWQATERLQLSLYASRFDDIWQQAYFGASHRQPLGGERALRVDLDAYRTRDSGQSRFGRIDTLASSLALGYEQG PQRITLAYQRVHGEQPFDYMAFGDGRSSASMVLANSVGYSDFNGPGERSWQLRYDLDLGALGLPGLSLHALHARGRAGASASSAAESIYAGLYGRDGRHR ESDLGFAYRVKAGPLAGLALRTSQAWHRGNASYLDGDIDETRLVVDYSRSIW
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site