Pseudomonas aeruginosa AZPAE15025, NT41_RS10515

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE15025 AZPAE15025_contig_12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATATGCGGCGTTTTTTTTGCCTTCCTGACCGTTCGGAGAATTCTTGCAGAATATGTAAAAGACTTTCGTTGGATATCGGGTTTTTCCGATAGTGGCAAA AAAATATAATCGCGCCAGCTCAATGGATAATTGTCGCTGGCTGTCGACGATATTCGTTCTGTCTTCATCGATCTCGCCATGCAAGAGCGGGACGTGGAAA GCCTAAAGCCCGATGAGTCGAAGAGACTTTCAATAGAAGAGTCCGACTGTGTTCCAACCGGTTTCCAGTGTCCGGAAATACACTGGCAAGACTTCCCGAC GCCGAACTTTGATTGCTCCTATTCGACGTCTTCTCAAGGCCGCTGATACCAGCGGCCTTTTTTTTCGGGTTGCGCCCGGCTGGGCGCCCCATGGGAGCGA TCGCCCGCGCGACGCCAGCAGAAGCGTCGCCGGGAACGACACCACAACACGCTTTCCGGCCTTGCCGGATTTCACCACGCTGTAAGAAGGAGCAACCGCA
DNA Sequence for Gene
>NT41_RS10515
ATGAGGAATCTGTTCGCCTTGACGCCGATGGCGCTGGCGCTGTGCACCGCGTCCGCCGCCTGGGCCGATGAGGGGGAAGCCAAAGAAGGCTTCATCGAAG GCTCCAGCCTCCAATTGCTGACCCGCAACTACTACTTCAACCATGACCGCCGGCACGCTTCCGGGCACGACAGCAAGGAATGGGCACAAGGCTTCATCGC CACCTTTCAGTCCGGCTACACGCCCGGCGTGGTCGGCTTCGGCGTCGACGCCTACGGCATGCTCGGGCTGAAGCTCGACGGCGGCGGCGGTACCGGCGGC ACCAGCATCCTGCCGATCACCGCGCCGAGCAAGGAAGGCTACGAATCCGGCAAGGCGCCCGATGAGTTCTCCAGTGGCGGGGCGGCGCTGAAGATCCGCG CCTTCGACACCGAGCTGAAGCTGGGCGACCAGTTCCTCAGCAACCCGGTGGTCGCCGGCGGCGAGTCGCGCATGCTGCCGCAGACCTTCCGCGGCGTGAG CCTGACCAACAACAGTTTCGAGGACCTGACCCTCACGGCTGGCCAGGTCAGTTTCACCAAGTACTACAACCAGAGCGGCCACCGTCGCCTCGGCTCGTAC TACGGCGAACTGCCGGGCGACCGCGACAGCCATCATCTCAGCTGGCTGGGCGGCACCTGGGGCGGTATCGAGGGCTTCACCAGCAGCCTGTACGCCGCCG AACTGCAGAACGTCTGGAAGCAGTACTACGCCGACGTCGACTACACCTACGAGATCGACGACAACTGGTCGCTGAACCCCGGCGCGCACTACTACAAGAC CGTCGACAGCGGCGACTCGCTGCTCGGCCGGATCGACAACAACACCTACAGCCTGCATTTCGCGGTCGGCTACAAGCAACACACCGTCACCGCGGTGCTG CAGAAGGTCAACGGCAACACGCCGTTCGACTACATCAACCAGGGCGACAGCATCTTCCTCGACAACTCGCAGCAGTATTCCGACTTCAACGGTCCCAACG AGAAGTCCTGGAAGCTGCAATACGACTACGACTTCGTCGCCCTCGGCCTGCCCGGCCTGAGCGCCTCGGCCTCGTACTCGCGCGGCAAGCTGGACCTGAC CCGGGTCGATCCGGACAGCCCCGGCTACGGCGGCTGGTACAGCGCCGACGGCAAGAACGCCAAGCACTGGGAACGCGACCTCGACCTGCAGTACGTGGTC CAGGGCGGTCCGGCCAAGGACCTCTCGCTGCGCCTGCGCTGGGCCACCCACCGCGGCACCGGCGGCTACAGCGCGGTGGACAACGACATCGACGAATACC GGGTGATCGTCGACTACCCCATCGACGTGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCCCGCGCGCTGGGCCCTTCGCCGGGCTCAGCGCTGGCGGAACAGTTCGCCGGGAGTGAAGCCGAAGAGTCCCTTGAAGGCGGCGATGTAGGCCGAGGT CGAGTCGTAGCCGCTGTCCAGGGCGGCGCCGGTGACGCTGTCGCCGGCCTCCAGCGCGTTGAGCGAGGCGAGCAGGCGCTGGCGTTGGCGCCAGAGCCGG TAGTTCATCCCGGTCTCGCGCTGGAACAGGCGCGACAGGGTCTTTTCCGAGGTGCCCAGGCGCTGCGCCCAGTCGCCCATGGTCAGGCTCTGGGTCGGTT CGTCGATCAGTGCCTGGCACAGCCGCAGCAGGCGCGGCTCGCGCGGCATCGGCAGGGAGAAGGCGACCTCCGGCAGCAGGCGTAGCTGGTCCAGCAGCAC CTGCACCAGCCGCGATTCGGCGCTGTCGCCCTCCGGGTAGTCCACCGGCAACTCGCAGAAACTCTTGATCAGCTCGCGCGCCAGCGGCGTCACCTCCAGC
Amino Acid Sequence
>porin
MRNLFALTPMALALCTASAAWADEGEAKEGFIEGSSLQLLTRNYYFNHDRRHASGHDSKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLKLDGGGGTGG TSILPITAPSKEGYESGKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYNQSGHRRLGSY YGELPGDRDSHHLSWLGGTWGGIEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSLNPGAHYYKTVDSGDSLLGRIDNNTYSLHFAVGYKQHTVTAVL QKVNGNTPFDYINQGDSIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGLPGLSASASYSRGKLDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYVV QGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site