Strain | Pseudomonas aeruginosa strain AZPAE15025 AZPAE15025_contig_10, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACTTCTCGGGCAACATCACCGACGTCGCGTGCGATATCAACGGCCAGGCGCCGGGTGCGGGCAACGTCACCAACGTCGACCTGGGTATCGTGGCGCCGAC CCATTTCACCGCCGTCGGAACCAACTCCACTTTCCAGGAGTTCGATCTGGTCCTCTCCGGTGCCGGCTGCACCAATGACAAGAAGGTTTCCATCGCCTTC GATACGGTCACCAACGTCGACCGCATCAGCGGCAACCTGATGCTGATGGGGCCGTCGAAAGCCAAGGGCGTGCAGATCCAGATCTTCAACAATTCGGCGG CCAACACCACGAAGATCCCGCTGGGCTTGGTCGAGGCCGCCCCGCAGAAGGCAACCATCGACAAGAACACGGCGACCCTGAAGTACAAGGCCTCCTATGT GTCCACCGAGAAGACCGTGATCGCGGGTACCGGCCTGTCCCATATCCGCTACCTCCTGGCGTACGAGTAAGCGGCGGTCGACGGACGAAGAGGTGAGGCC
|
|
DNA Sequence for Gene |
>NT41_RS09410
ATGGCGCCGCTAATGCATCGTTTTCATTCTTTCGTGGCGGCAAGCGCCGTGGCCATCGCCCTGTGCGCCGGAACGGCTCATGCCGGGCTGATCGCACAGG GCACTCGCGTCGTCTTTCCGGCCAGCGAGCGCGAGGTCACCTTGCGGGTCAGCAATACGTCCGGCACTCCCGTGCTGGCGCAAGCCTGGATCGACGATGG CCGGCAGGACGTTCCCCCCGAGGAACTGCAGGTCCCCTTCAGCGTCACGCCGGCCGTGACGCGAGTGGACCCCAATGGCGGCGCCGTATTGCGCATCGCC TACCTGAAGGCCCCGTTGCCGACGGATCGCGAATCGCTGTTCTGGCTGAATATCCTGGAAGTTCCGCCCAGGGACGAAGACGAAAACAATGCATTGCAGT TTTCCTTTCGTTCGCGCTTCAAACTCTTCTTTCGACCCAGCCAGTTGAAGAGTGTCGATTCGGCTGCCGGGAAACTTCAATGGAAGTTTCTGGAGTCAGG GGGAGCAGGAAAAAAGACCGTAGTACAGGTAAATAATCCGACGCCTTACTACGTTTCGTTCGCCAGCGTCGAATTGATTGTCGATGGCCGTGTCATGTCC GTGGGAAAGGGAATGGTCGCGCCATTCTCGACGAAGGAGTTCGACTGGCAGGGAAATCCGAAGAACATGGAAGCCGCTTCCGTCAGATACGAAGTCATCA ACGATTACGGTGGCCGCAATACCCTCGATAGGGCACTCGGCAAATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CCCCTCCGTTTCCCCGCTTTTTACTTACGGCCCGACATATGAGTGGCGATTTTAAAATCGCTGCAGGGATTACATATGCCCAAAGTTTCTCTTCATAGGT GCTTGTCCGCTCCCGCTTACGGTGGGCAGGTCGCCCTGTTGCGAATGGCGATACAGGGAGGGATCGCCGTTCGTTCCCTGCGATTCGCCTGTCTGCTGGC ACTGTTTCCTTCGCTGTCCTCCTGCCAGTCCTGGTCCTCCGTCGGCGCCGCCGGCGTAGCCGGGGCGAAAGCGAAGGAGGCCAGGGCGGGAGCACCGGCG AAACAGCCGCAGGCGCCCGCGGTGGCCGTTGCGTCACCGGCCGGCGGGTTGGACGCACCGTCGCGGCGGATCGTCTTCGACGCGCAGATGCTGGCCCTGG GGCCGGGCGGACGCTCGATCGATACATCGCGTTTCGAGCGCGGCGACGTCATCGAGCCAGGCCGCTATCGCCTCGACCTGCTGCTCAACAGCCGATGGCG
|
|
Amino Acid Sequence |
>molecular chaperone
MAPLMHRFHSFVAASAVAIALCAGTAHAGLIAQGTRVVFPASEREVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVDPNGGAVLRIA YLKAPLPTDRESLFWLNILEVPPRDEDENNALQFSFRSRFKLFFRPSQLKSVDSAAGKLQWKFLESGGAGKKTVVQVNNPTPYYVSFASVELIVDGRVMS VGKGMVAPFSTKEFDWQGNPKNMEAASVRYEVINDYGGRNTLDRALGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|