Pseudomonas aeruginosa AZPAE14925, NS41_RS28205
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14925 AZPAE14925_contig_42, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCTCTACATCCTCGCCTTCATGGCGGCGACCCTCGCCTTGTGCCTGGGCGGCTACGCCGGCTACGGCTACCTGCTGGTGGCGGTGGCGGTGAGCCTGTG GTGGCTGGCCATCGCCCTGACCGGCTACTGGACCGCCGACGACCGGGTCTGGGCGCGCAAGCTGTTCGCCTTCTCCATCGTCGCCATCACCGCGCTGAGC GTGATGATGTCCATCGACTTCCAGGTGGCGCCCGCCACCCATCTGGTCGCCTCGCTGTTCTGAGGCGACACGCTTTAGGGAAGCCCCGCCGGTCGATTGG CGGGGCTTTTTTTTGTCTGCGCGATGGCAGGGATGCGGTCGCCGCCTGGCAGAAGGGCCGCGCGGCGAGCCCTCTGTTCCGGGACTCTGCCGTTGGTTAT CAGATTTTTCCGGGAGCTTTTTCGGAGCTGTCCGGCTTGTGGAAAAAACCCTCCATCAATCAAATGCCAATGATTCTCAATAACCAAGATGGAGTACTTC
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| DNA Sequence for Gene |
>NS41_RS28205
ATGGATCGTCGCAACGAGCCGTCCCCCTTGCCCACCAAACGCCCGCTGGCGCCGCTGATGCTGTTGATGGCCGCCTGCTCCTCGCCGGCCCTGGCCGAGG ACGCGGCGCGCAAGGACGATCCCCTGGAATTGGGAGCCGACACGGTCACCGGCGAGCAGGCGTCGTCCAGGGTCGAACGCTCGGCCTCGGCCAAGTACGC CGTGCCGCTGCTGGATACCCCGCAGACCGTCACGGTGGTGCCGCAAAAGGTGATCCAGGAGCAGAACGCCCTGAGCCTGCGCCAGGTGCTGTCCAACGTC TCCGGCATCACCTTCAACGCCGGCGAGGGCGGCGGCGGTTCCGGCGACAGCATCAACATCCGCGGCTTCAGCGCCAACGCCAACATGCAGGTGGACGGGC TGCGCGACAGCGCCCAGACCAGCCGCAGCGACCTGTTCAACCTGGAGGCGGTGGAAGTGATCAAGGGACCGAACTCGGTGTTCGGCGGCGCCGGCACCAG CGGCGGCAGCATCAACATGGTCAGCAAGCAGCCCAAGGCCGAAGCCTTCACCCACCTGGGCGCCGGGCTGGGCACGGACCGCTACCGGCGCCTGACCCTG GACACCAACCAGCCGCTGGAAGGGCTTGGCGAATCGACCGCCTTCCGCCTCAACCTCATGGCCCACCACAACGACGTCGCCGGGCGCGAACAGATCGACA AGCAGCGCTGGGGCATCGCGCCATCCCTGACCTTCGGCCTGGACACCCCGACCCGCCTGACCCTGAGCTACTTCCACCAGCGCGACGACAACCTTCCCGA CTATGGCGTGCCGGCGCTGAACGGGCGCAAGCTGGACGGCGTCAGCCGCCACGATTATTTCGGCTGGCGCAACCTGGACGAGGAACGGATCGACAACGAC GTCGCCACCCTCAAGCTCGAACACGATTTCAGCGACGACTTCCAGTTGCAGAACCTCATCCGCTATTCCCACCTGCATCGGGACACGGTGATCTCCGCCT CCCACGTCAACCAGAAGGGCCTGCCGCCGGGTCGCTACCTGCCGGCGGGACCGCAAGCCTACGGGCGCGATTCGAAGACGCGGATGTGGATCAACCAGAC CAACCTCACCGGCCGCTTCGATACCTTCGGCCTGGCGCATACGCTGATCGGCGGCTTCGAGCTGTCCCGCGAGACCTACGACCGCACCACCTACTCCTAC AACCTGGGCAAGTTCTACCCGGCCAACGGCTTCGACCTGCACAACCCGCCGGGCTACTGGAACGGCCCCACCGACAAGCGCGACAGCGCGCGCAACCGGA CCGAACTGGAGGTCAAGGCGCTGTACGCCTTCGACACCATCGCCCTGGACGAGCGCTGGGACCTCAGCCTGGGCCTGCGCTACGACTGGATCGACGGCAC CTCGCGGAGCACGCCCTCAGGCAAGCCGACGGTGCGCGCCGACAGTTCCGACGGCAAGCTGAGCACGCGGGCGGGGCTGGTATTCAAGCCGCTGGAGAAC GGGCGGGTGTACGTCTCCTACGGCACCTCCTTCAACCCCTCGGCGGAACACCTGGTCACCACCGGCTCGGGCGTGACCGAGGCGACCGGAGGCCTGGCGC CGGAGAAGAACAGCACCTACGAGCTGGGCACCAAGTGGGAGTTCCTCGGACGGCGCCTGGAGCTGGACGCGGCGCTGTTCCAGGTGAAGAAGGAAGACGC CCGCGAACGCCTGGCCGACGGCAGCTACGTGCTTGCCGGCGAACAGCGCGTGCGTGGCCTGGAGCTGAGCGCCAGCGGCAAGTTGAACGAGCACTGGGAC CTCTTCGCCACCTACACCTACCTCGACAGCGAAACCCTGAAATCCAGCAACCCGCAGCGTGAGGGACAGGCCCTGGGCAATACCCCGCCGCGCTCGTTGA GCCTCTGGAGCACCTACGAACTGCCCGAGGGCGTGACCCTGGGCTATGGCGCACGCTACGTCAGCCAGCGCAACGTCACCTCGGTGGACAACGGCAAGCT GGATGCCTACTGGGTGCACAACATGATGCTCGGCTACCAGGCGACGCGCGACCTGAAACTGCAACTCAACCTCGACAACCTGTTCGACAAGGCCTACGTC GAGCGGGTGCGCCAGGTGTACGGCAACCAGTCGCGCTCCTCGGCCATCGAGTATGGCGACGGTCGCACGGCGATTCTTTCGGCGATCTACGCGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGCAGGCAGGCCATGGAAGCCGGCGCCCACTGCCTGGGCGCCGGTTCTTCCCGGCGATTTCCTCTGAACTTTTTCACTGCGGCGCCTATCAACTCCTTT GCAAGTCATTTTTCAGGGAGCCTCTTCGATGGCACGCAAAAACGCAGTGAAAGACAACCTCGAGCAGATCCAGCACCAGAGCTACAGCGAGCTGCAGGAA CTGCTCTCCGAAGCCAACAGCATGCTCGCCGACAGCGCCGCCTTCGCCGGCGACAAGGCCGACAGCGCCCGTGCGCGGATCGGCGCGCTGCTGGAGAAGG CCAACGATGCCCTCGGCAAGGGCGGTAGCGCCGTGGCCGAACGCAGCCGCCACGCGGTGGATGCGACGGAAAGCTATATCGGCGCCAATCCCTGGCAGAC CGTGGCCATCACCACCGCGGTGGGCCTGCTCGCCGGCTTCCTGCTCGGGCGTCGCTCCTGAGCACGCGGTCGGTGCCGCACAACGGACTCGTTACCTTCG
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| Amino Acid Sequence |
>TonB-denpendent receptor
MDRRNEPSPLPTKRPLAPLMLLMAACSSPALAEDAARKDDPLELGADTVTGEQASSRVERSASAKYAVPLLDTPQTVTVVPQKVIQEQNALSLRQVLSNV SGITFNAGEGGGGSGDSINIRGFSANANMQVDGLRDSAQTSRSDLFNLEAVEVIKGPNSVFGGAGTSGGSINMVSKQPKAEAFTHLGAGLGTDRYRRLTL DTNQPLEGLGESTAFRLNLMAHHNDVAGREQIDKQRWGIAPSLTFGLDTPTRLTLSYFHQRDDNLPDYGVPALNGRKLDGVSRHDYFGWRNLDEERIDND VATLKLEHDFSDDFQLQNLIRYSHLHRDTVISASHVNQKGLPPGRYLPAGPQAYGRDSKTRMWINQTNLTGRFDTFGLAHTLIGGFELSRETYDRTTYSY NLGKFYPANGFDLHNPPGYWNGPTDKRDSARNRTELEVKALYAFDTIALDERWDLSLGLRYDWIDGTSRSTPSGKPTVRADSSDGKLSTRAGLVFKPLEN GRVYVSYGTSFNPSAEHLVTTGSGVTEATGGLAPEKNSTYELGTKWEFLGRRLELDAALFQVKKEDARERLADGSYVLAGEQRVRGLELSASGKLNEHWD LFATYTYLDSETLKSSNPQREGQALGNTPPRSLSLWSTYELPEGVTLGYGARYVSQRNVTSVDNGKLDAYWVHNMMLGYQATRDLKLQLNLDNLFDKAYV ERVRQVYGNQSRSSAIEYGDGRTAILSAIYAF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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