Pseudomonas aeruginosa AZPAE14925, NS41_RS25625

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0015276 ligand-gated ion channel activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00079
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00079
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd13689 PBP2_BsGlnH - - 24 251 5.94286E-112
SMART SM00079 GluR_14 IPR001320 Ionotropic glutamate receptor, C-terminal 32 252 0.0085
PANTHER PTHR30085 AMINO ACID ABC TRANSPORTER PERMEASE - - 7 259 2.5E-60
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 1 252 9.31E-69
Gene3D G3DSA:3.40.190.10 - - - 26 246 9.6E-62
SMART SM00062 AABind_6 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 32 253 5.5E-63
Gene3D G3DSA:3.40.190.10 - - - 120 211 9.6E-62
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 33 251 1.6E-60

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.