Strain | Pseudomonas aeruginosa strain AZPAE14925 AZPAE14925_contig_29, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCTCAGCCTGCAAAAGGTCGATGGCGACACCCCGTTCGACTTCATCGCGCAGAACGACCGGACCTTCCTCTACGAAAGCAACGCCATGCAGTACGCCGA CTTCAACGGCCCCGGCGAGCGCTCGTGGAAGATCCAGTACCAGGCCAGCCTGGCCTTCCTCGCCGCCCCGGACTGGCAGTTCGGCGCCGCCTACGGCCGT GGCCAGGCCGACCTGACCCGGATCGACCCGGACAGCGCGGGCTACGGCTACCTCTACAACCCCAATGGCAAGAACGCCCAGCACTGGGAACGCGACCTGT CGCTGCGCTACGCCTTCCCCGCCGGCCCGGCCAAGGGCCTCAGCGTGACCCTGCGCTGGGCCACCCACCGCCCCGGCGAAGGCTACACCGCCCCCGGCAA CACCCGCGGCAACTCCAGCTCCGACGAATACCGGGTGGTGGTCGACTACCCGATCAGGTTGCTCTGAACCCACGGAACCAGAAAAAAGAGAAACTCCCTC
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DNA Sequence for Gene |
>NS41_RS24705
ATGCGTGCAGCCCTGCTACCCACCTTCGGCGCCCTCTCCGCCGCGCTCTGCCTGGAGGCCCGCGCCGACGCCGTCGCGCTGCCGCCGCTGGCGCTCGGCA ACGCTAGCTTCATGGACGGCGTCAGCCGTCCCGGCATGCTCTTCGAACTGCCCCTGCAATACGTTCGGGCGAACAACGCCAGCGACGCCGGCGGGCATTC GGTTCCCGGTCGGCAACGGGTTCGTGGCACCACGCTGTTGCCGCACTTCGCCTACCTCAGCCAGAACACCCTGCTCGGCGCCCACTACGGCGCCGAAGTG CTGCTGCCGCTAGTACGCCTGGACCTCGATATCGACGGCGGCCCGGACGGCCGGCGCACCCGCCAGGGCGACCTGATCGTCAGTCCGCTGATGCTGCAAT GGGGGCCCGCTACGCTGTTCGGCCGCCCCTACTGGCAGCGCCTGAACTTCGTCTTCTCCCTGCCCACCGGCGACTACGACAAGGACGCCGCGATCAACAC CGGCAGCAACACCTGGATCTTCAACCCGCACTACGCCTTCACCTGGGAACTGGGCGAGCGCCTGGAACTCAGCGGCCGCCTGCACTACGCCTGGATCAGC CGCAACGACGACCCCTCGCCGCGCCTGGGCGCAAACGACGTACAGCCGGGCCAGGCGCTGCACGCGAACTTCTCGATCTCCTACGCGCTGGACCCGCACT GGCGGATCGGCCTGGCCGGCTACCAGTTGAAACAGATCAGCGCCGACCGCATCGACGACCACCGGCAGGCCGACTCGCGCGAGCAGGTCTTCGGCATAGG CCCGGGGGTGATGTACAGCCAGGGCAGGCAAACGCTGTTCGCCAACCTCTACGCCGAAAGCGGCGCGCGCAACCGCAGCGAAGGCAACCAACTGACCCTG CGCTACCTGCTGGCGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATCGGCGGATAACGCCCTGGAAACGCCGACACCTCCCCAGCTCCGTAGGGCGAATAACCGCTCGCGGTTATCCGCCGCTTATCCGGGGTATCGGCGGATA CCGCCTGTGGCGGTATTCGCCCTACGCACCCCGGAAACGCCGGACAGCTCCCCAACTCCGTAGGGCGAATAACCGCTCGCGGTTATCCGCCGCTTATCCG CGACATCGGCGGATAACGCCCATGGCGTTATTCGCCCTACACACCCCGAAAACACCGGAAAGCGTCCAGGTCCGTAGGGCGAAAACCGCTCGCGGTTATC CGCCGCTTAGCCGCGACATCGGCGGATAACGCCCATGGCGTTATTCGCCCTACACACCCCGGAAACGCCGGACAGCTCCCCAACTCCGTAGGGCGAATAA CCGCTCGCGGTTATCCGCCGCTTATCCGGGGTATCGGCGGATACCGCCTGTGGCGGTATTCGCCCTACAGGCCCTGGAAACGCCGGACAGCTCCCCCGGA
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Amino Acid Sequence |
>hypothetical protein
MRAALLPTFGALSAALCLEARADAVALPPLALGNASFMDGVSRPGMLFELPLQYVRANNASDAGGHSVPGRQRVRGTTLLPHFAYLSQNTLLGAHYGAEV LLPLVRLDLDIDGGPDGRRTRQGDLIVSPLMLQWGPATLFGRPYWQRLNFVFSLPTGDYDKDAAINTGSNTWIFNPHYAFTWELGERLELSGRLHYAWIS RNDDPSPRLGANDVQPGQALHANFSISYALDPHWRIGLAGYQLKQISADRIDDHRQADSREQVFGIGPGVMYSQGRQTLFANLYAESGARNRSEGNQLTL RYLLAF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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