Pseudomonas aeruginosa AZPAE14925, NS41_RS24490

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14925 AZPAE14925_contig_27, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCGTCCCGAGGAGTACCCGGTGTACAACCACGACGACCTGGCCGCCAGCTTCGCCCCGGTGATGCTCGCCCTGCGCCAGGCGCTGGCGACGGTGATCGA CGCCAAGGCGATCGCCATCCCGATCGTCGAGAAGGCCTACGGCGTGCACGTCGCGATGCTCAGCGACCGCAGCCTGATCGACAACGCCAGCTTCGTCCTG GTGGTGCGCGCCGACGTCCCCGGCGAGAGCCTGCGCGGGCACTTCCCGCAGCAGGCCAAGGTCGGCTCGGTGGAGCACATCCGCGACCTGGTCAACCTGC AACTGCCGGGTATCGGCCTGCTGCCGATGCCGGTGGCGCCGCGGCAGATCCCCTACCACGCCGGCTCCACCTATTTCGAACTGGACCGCGGCAGCGCGCA TTGGAAGCAGCTGACGCACTCCGGCGGCTTCGCCTTCCACATCGCCGGCCAGTTCCCCGGGCTGAACCTGGCCTTCTGGGCCATTCGAGGATAAGCAACG
DNA Sequence for Gene
>NS41_RS24490
ATGCCTCCCATCGACGATCCCTTCGGCACCCCGGCCGGCGGCGGCAACGGAAGCCCGCCCGACGACCGCACCATGATCATGCCGCGTCCCGGCGGCCGCG CCCCGGAACCGGCCGGCGGCCCCCGCGGCGGCGATCCCTACACGCCGCCGCCGATGGCCAGCCTGGCGCCGCTGAGCGGCCGCGGCGACGGCCTCAACCC GCTGGAGCAGGCCGCCGGCCCACTGCTGGCGATGCTCACCCGCCTGCGCAACACCATCGCCCATCCGGCGCCGGCCAGCCTGCGCGCGCAACTGCTCGGC TACCTGCGCCAGTTCGAGGAGAAGGCACGCCAGGCCGGCGTGGCGCCGGACGAAGTGATGCTGGCGCGCTACGTGCTCTGCACCGCCCTCGACGAAGCGG TGCTCAGCACGCCGTGGGGCAGCACCAGCGACTGGGGCAAGCAGAGCCTGCTGATCACCCTGCACAACGAGGCCTGGGGCGGCGAGAAGGTCTTCCAGTT GCTCGAACACTGCCTGCAGAACCCGCACCAGCGCCTGCACCTGCTGGAGCTGCTGTACCTGTGCACCAGCCTCGGCTTCGAAGGCCGCTACCGGGTCATG CACGACGGCCGCAGCCAACTGGAGGCGCTGCGCGAGCGCACCGCGGCGGTGATCCGCAGCACCCGCGGCGAGTACGAGCACGAACTGTCGCCGCACTGGC GCGGCCTCAGCGTGATGCGCGACCGCCTTTCGCAATACCTGCCGCCGTGGGTCGGTATCGCCATCGGCCTGGCCTTGCTGCTGGCCTTGCTGTTCGGCCT GCGGATGAAGCTGGCCGCCGACGCCGAGCCGGTGTTCAAGCGCATCCACGCCATCGGCGAGATCCCGGTGCAGGCCATCGACCGCCCGGCGGTGCAGCCG CGGGTGATCGAGCGGCCACGCCTGGCGCGCTTCCTCGCCGACGACATCAAGGCCCAGCGAGTGGCGGTGGAGGACGCCGTCGACCGCTCGGTGGTGACCA TCCGCGGCGACGAGCTGTTCGCCAGCGCCAGCGCCAGCGTGCGCGACGAGTTCCAGCCGCTGCTGCTGCGCATCGCCGACGCCCTGCGCAAGGTCAAGGG CCAGGTGCTGGTCACCGGCCATAGCGACAACCGGCCGATCGCCACGCTGCGCTACCCGTCCAACTGGAAACTGTCCCAGGCCCGCGCCCAGGAGGTCGCC GACCTGCTCGGCGCGACCACCGGCGACGCCGGCCGCTTCACCGCCGAAGGGCGCAGCGACACCGAGCCGGTGGCGAGCAACGCCAGCGCCGAAGGCCGCG CACGCAACCGCCGGGTGGAAATCACCGTATTCGCGGAGGGCGCGCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAGGCTTCCTCAACTTCTTCGCGCGCTGGGTGGTGCCGGTGCTCGGCCTGCTCGCCCTGAGCCTGATCATCTGGTTCCTCGGCCCGCTGCTGCGCCTGGG CAACTACGAACCGCTGGCCTCGGCGACCAGCCGCTGGGTGCTGATCGTCCTGCTGTTCCTGGTCTGGATCGGCTTCCGCGTGCTGCGCATCGTGCAGGCC CGGCGCAACGCGGCGAAGGTCATGCAGAGTCTCGCCGAGGTCAGCGCGCCGGACGCCGCCAGCGTCGCCACCGCCGAAGAGCTGGCGACCCTCAAGCAAC GCATGGACGAGGCCCTGGCCCTGCTCAAGCGGGCCAAGCTGGGCGGCAGCGAGCGGCGCAACCTGTACGAGTTGCCCTGGTACGTGATCATCGGCCCGCC CGGTTCGGGCAAGACCACCGCGCTGATGAATTCCGGCCTGGACTTCCCGCTCGCCGCACAGATGGGCGCCGGGGCGATCCGCGGGGTCGGCGGCACGCGC
Amino Acid Sequence
>type VI secretion protein
MPPIDDPFGTPAGGGNGSPPDDRTMIMPRPGGRAPEPAGGPRGGDPYTPPPMASLAPLSGRGDGLNPLEQAAGPLLAMLTRLRNTIAHPAPASLRAQLLG YLRQFEEKARQAGVAPDEVMLARYVLCTALDEAVLSTPWGSTSDWGKQSLLITLHNEAWGGEKVFQLLEHCLQNPHQRLHLLELLYLCTSLGFEGRYRVM HDGRSQLEALRERTAAVIRSTRGEYEHELSPHWRGLSVMRDRLSQYLPPWVGIAIGLALLLALLFGLRMKLAADAEPVFKRIHAIGEIPVQAIDRPAVQP RVIERPRLARFLADDIKAQRVAVEDAVDRSVVTIRGDELFASASASVRDEFQPLLLRIADALRKVKGQVLVTGHSDNRPIATLRYPSNWKLSQARAQEVA DLLGATTGDAGRFTAEGRSDTEPVASNASAEGRARNRRVEITVFAEGAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site