Pseudomonas aeruginosa AZPAE14928, NS44_RS08745
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14928 AZPAE14928_contig_9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACGGTGCTCGAAGGCAGTTCCGGGTTCGTCTACTACGTGTCGGTGGCCGGCGTCACCGGCGCCAACGCGGCGACCCTGGAGCACGTCGAGGAAGCGGTGG CGCGCCTGCGCCGGCATACCGACCTGCCGATCGGTATCGGCTTCGGCATCCGCAGCGCCGAACACGCCGCCGCGGTCGCGCGGTTGGCCGACGGCGTGGT GGTCGGCTCGGCGCTGATCGACCGGATCGCCAAGGCCCGCGTCAATGCCCAGGCGGTCAAGGATGTCCTCGCCCTGTGCGGCGAGCTGGCCGAAGGCGTG CGCAACGCACGCTGACAGACCCTGACAGCGGCATTCGCCAGGCGCAGGCAACCCGCTGCGCCTGGCCTTGCGTTGCACGCTGCCAGAACCGTGAGGAAAA ATTCACGGTCACTTTCAGAAACGTCTTATTGTCCGCCGACTCTGCCGAAGCCTTGAATAGCGCCTCACCCAAATAGCCAACGCATTCAAAGAAGGTTCGC
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| DNA Sequence for Gene |
>NS44_RS08745
ATGAGTAAGGTGCTGATCGTCGATGATCATCCCGCTATCCGCCTGGCCGTGCGCTTGCTGTTCGAGCGCGACGGTTTCACCATCGTCGGCGAGGCCGACA ACGGTGCCGAAGCCCTGCAGGTAGCCCGCAAGAAGTCTCCCGACCTGGCCATCCTGGACATCGGCATCCCCAAGATCGACGGTCTCGAAGTGATAGCCCG CCTGAAGTCCCTGAAGCTGGACACCAAGGTCCTGGTCCTGACCCGGCAGAATCCGGCGCAGTTCGCCCCGCGCTGCCTGCAGGCCGGCGCCATGGGCTTC GTCAGCAAAAGGGAAAACCTCTCCGAGCTGCTGCTCGCCGCCAAGGCCGTGCTGGCCGGCTACATCCACTTCCCCACCGGGGCGTTGCGCAGCATCAACC AGCAGAGCCGCGACAACGAGGCCCGCATGCTGGAAAGCCTTTCCGACCGCGAGATGACCGTGCTGCAGTACCTGGCCAACGGCAACACCAACAAGGCCAT CGCCCAGCAGCTGTTCCTCAGCGAGAAAACCGTGAGCACCTACAAGTCACGCATCATGCTGAAACTCAACGCCCATTCCCTGGCCGGCCTGATCGATTTC GCCCGCCGCCACGAGCTGATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGATCCCATGCGAACGTTCGACCTGACCGCCGCCCTGGGCGACCGCGCCAACCAACCGGAGATCAGCCGCCTGCTCGTCGCGCAGCTGATGACCAGCAAC AACGAAGACACCCGCAAGCTGCGGCGCGCCCAGGAGCGCGAGCAGACCCAGGAACTCAACGAGCTGGCGCACCGCCTGGCGGGCATGGCCTCGCTGATCC ACGCCCACGCCGTGGAACGCGCCTGCCACCAACTGGAGATCGCCTGCGGCGAAAGCTCCGTGCGCAAGCTCGCCGATGCCGTCGACGACCTGGTGACGGC ACTGGGCGAGCTGCAATGCGAACTGCACGACTGGATGACGATGACCGCGCCTCAAGGCACGGCGAAGTCATAGCGTTGCGGGCCTTCGTCCAGGATCGAC AGGTCCAGCGGGCGAATGGCTCCCATCCAGATGGCTCGGTCGCGATGGTCGAGCAGATCGTTGCCGGTGACCGGGTGGATGAACACCACCAGGTCCTGCC
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| Amino Acid Sequence |
>LuxR family transcriptional regulator
MSKVLIVDDHPAIRLAVRLLFERDGFTIVGEADNGAEALQVARKKSPDLAILDIGIPKIDGLEVIARLKSLKLDTKVLVLTRQNPAQFAPRCLQAGAMGF VSKRENLSELLLAAKAVLAGYIHFPTGALRSINQQSRDNEARMLESLSDREMTVLQYLANGNTNKAIAQQLFLSEKTVSTYKSRIMLKLNAHSLAGLIDF ARRHELI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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