Strain | Pseudomonas aeruginosa strain AZPAE14928 AZPAE14928_contig_6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCTGCGCGGCCTGGCTTCCGAGGGCGCCGAGCGCCTTGGCGCGCTGGCGCGTTTCGCCGATTACCTCTGGCACCTGGCGCTGCCGGTGGGTTCGCTGGTG GTCGGCGGTTTCGCCAGCCTGACCCTGCTGACCAAGAACAGCTTCCTCGACGAGATATCCAGGCAGTACGTCGCCACCGCTCGCGCCAAGGGCCTCAGCG AGCGCCGGGTGCTCTACGGCCATGTGTTCCGCAACGCCATGTTGCTGGTGGTGGCCGGGCTGCCGGCGGCGCTGGTCTCGGTGTTCTTCACCGGGTCGCT GCTGATCGAGGTGCTGTTCTCCCTCGACGGCCTCGGCCTGATGGGCTACGAAGCGGCGCTCGGCCGCGACTACCCGGTGGTGTTCGGCAGCCTGTTCATC TTCACCCTGCTCGGGTTGCTGGTGAAGCTGGCCGGCGACCTGGCCTACAGCCTGGTCGACCCGCGCATCGACTTCGCCGCGAGGAGACAGTGAGATGGCC
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DNA Sequence for Gene |
>NS44_RS06435
ATCGTCCTTTCCCCGCTGCACCGCCGCCGCCTCGCCGCGTTCCGCGCCAACCGCCGCGGGCGCCTGGCGCTGCGGCTGTTCCTCGCGCTGTTCGTCACCT GCCTGTTCGCCGAGCTGATCGCCAACGACCGCCCGCTGCTGCTGGAATACCGTGGCCAGTGGTTCCTGCCGGTGCTGCGGGACTATCCGGAAACCGCCTT CGGCGGCGAGCTGCCGTTCCCGCCGGACTACCGCGGTCGCTTCATGAGCGAACGCATCGCCCGCGACGGCTGGGCGCTGTGGCCGCCGATCCGCTTCGAC GCGCGCAGCATCAACTACGCGCGCCCGGCGCCGGCGCCGCCCTCGGCGGAGAACTGGCTGGGTACCGACGACCAGGGCCGCGATGTGCTCGCGCGGGTGA TCTACGGCCTGCGCCTGTCGATTCTCTTCGCCCTCGGCCTGACCCTGGCCTCGTCGTTGCTGGGAATCTGCGCAGGCGCGGTGCAGGGCTACTACGGCGG CTGGATCGACCTGTTCGGCCAGCGCTTCATCGAGGTCTGGTCGGGTCTGCCGATGCTTTACCTGCTGATCATCCTCGCCAGCCTGGTGCAGCCCGGGGTC GGCTGGCTGCTGGCGATCATGCTGCTGTTCTCCTGGACCAGCCTGGTCGACGTGGTTCGCGCCGAGTTCCTGCGCGGTCGTCACCTGGAGTACGTCAAGG CGGCGCGAACCCTCGGCCTCGGCGACGCCGGGGTGATGTTCCGGCACATCCTGCCCAACGCCATGGTCGCGACCCTGACCTTCCTGCCGTTCCTGCTCTG TGGCGCGGTGACCACCCTGACCGCCCTGGACTTCCTCGGTTTCGGCCTGCCGCCCGGCTCGCCGAGCCTTGGCGAACTGGTCGGGCAGGGCCGCGACAAC CTCCAGGCGCCCTGGCTCGGGCTGACCGTGTTCGTGGTCCTGGCGACCTTGCTCAGCCTGCTGGTGTTCATCGGCGAAGCGGTGCGCGACGCCTTCGATC CGAGGAAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GATGAACCGGGAACTGTTGCGAGTGGAAAACCTGAGCGTCGCCTATGGCGACACGCAGGTCGTGAAGGGGATCGACTTCAGCCTGCGCGCCGGCGAGACC CTGGCCCTGGTCGGCGAGTCCGGCTCCGGCAAGTCGCAGACCGCCCACGCCCTGCTGCGCCTGCTGCCGGGCGCGGCGCGCCTGGGCGGCAGCGTGCGCC TGGACGGCGAGGAACTGCTCGCCCTGTCGCCGCAGGCATTGCTGGCGATTCGTGGGCAGCGCATCGGCATGGTGTTCCAGGAGCCGATGACCTCGCTCAA TCCATTGCAGCGCATCGGCCGCCAGGTCGGCGAGGGCCTGCGCCTGCATCGCCGCCTGCGTGGCGCCGCGCTGCGCGGGCGGGTACTGGAACTGCTCGAA CTGGCCGGCCTCGAGCAGCCGCGACGCCTGCTCGAGGCCTATCCGCACCAGCTCTCCGGCGGCCAGCGACAGCGAGTGATGCTGGCCATGGCGCTGGCTT
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Amino Acid Sequence |
>ABC transporter permease
MVLSPLHRRRLAAFRANRRGRLALRLFLALFVTCLFAELIANDRPLLLEYRGQWFLPVLRDYPETAFGGELPFPPDYRGRFMSERIARDGWALWPPIRFD ARSINYARPAPAPPSAENWLGTDDQGRDVLARVIYGLRLSILFALGLTLASSLLGICAGAVQGYYGGWIDLFGQRFIEVWSGLPMLYLLIILASLVQPGV GWLLAIMLLFSWTSLVDVVRAEFLRGRHLEYVKAARTLGLGDAGVMFRHILPNAMVATLTFLPFLLCGAVTTLTALDFLGFGLPPGSPSLGELVGQGRDN LQAPWLGLTVFVVLATLLSLLVFIGEAVRDAFDPRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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