Strain | Pseudomonas aeruginosa strain AZPAE14928 AZPAE14928_contig_34, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
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DNA Sequence for Gene |
>NS44_RS28425
GCCACGGTGATCCTCACCGACGGCAACGGCAACCCGATCGGCCAGGTCACCGCCGACGGCAGCGGCAACTGGAGCTTCACGCCCGGCACGCCGCTGGCCA ACGGCTCGGTGATCAATGCGCTGGCCCAGGACGCCGCCGGCAACACCAGCGGCCCGGCCAGCACCACGGTGGACTCGGTAGCCCCGGCCACCCCGGTGCT CGATCCGAGCAACGGTACGGTGATCAGCGGTACCGCCGAAGCCGGGGCCACGGTGATCCTCACCGACGGCGGCGGCAACCCGATAGGGCAGGCCACCGCC GATGGCAGCGGCAACTGGAGCTTCACTCCGGGCACACCGCTGACCAACGGCACGGTGATCAATGCGGTGGCCCAGGACGCCGCCGGCAACACCAGCGGTC CGGTCAGCACCACGGTGGACGCGGTGGCCCCGGCCACCCCGGTGATCGACCCGAGCAATGGTGTCGAACTCAGCGGCACCGCCGAACCCGGCGTCCGGGT GATCCTCACCGATGGCAATGGCAACCCGATCGGCCAGACCCTCGCCGACGGTAGCGGCAACTGGACCTTCACACCGGGCACGCCGCTGGCCAACGGCACG GTGGTCAACGCCGTGGCCCAGGACCCGGCCGGCAATACCAGCGGTCCGGCCAGCACCACGGTGGATACGGTGGCGCCGGCCACGCCGGTGATCAATGCCA GCAACGGCAGCGTGATCACCGGCACCGCCGAGGTCGGCGCCAAAGTGATCCTCACCGACGGCAACGGCAACCCGATCGGCGAGACCACCGCCGACGGCAG TGGCAACTGGACCTTCACCCCCGGCACGCCGCTGGCCAACGGTACGGTGATCAACGCCGTCGCCGAAGACGCCGCGGGCAACGCCAGCGGTCCGGCCAGC ACCACGGTGGACTCGGTGGCGCCGTCCGCTCCGCTGTTGAGCATCAGCGCCGACGGCGCGCTGCTGACCGGCACCGCCGAGCCGAACAGTCAGGTGCGTA TCGTGGTCAACGGCGACACCGCCAACCCGATCACGGTCACCGTCGACGGCGCCGGCAACTTCAGCCTGCCGTTCGCGCCGCCGCTGATCACCGGCGAACT GATCGCCGGGGTTGCCGTGGACGCCGCCGGCAACGTCAGCGGGCCGGCCACCATCAACGCGCCGGACCTGGCGCCGCCGACCATCAGCGTGCCGGAAGCC GCCGATACCTGGATCAACGCCGCGGAGATCGGCGACGGCATCCAGGTCGATGTGACGGTCCGTCCGACCATGCAGGTCGGCCAGGTGGTCACGGTCAAGT TCGCCGGGCAGAACGGCTACGAGGCCGAGGTCAGCCATACCCTCACCGCCGGCGACATCGCCGCCGGCAACCTGACCCTGACCCTGACGCCTCCCGGCGG CATGGGCCCGTTCCCGGAGGGCGCCTCGACCGTCACCGCCGACATCAACGGCGGCACCGCGTCGACCCCGGTGCCGTTCACCATCGACACCATTCCGCCG GCGACCCCGGTGCTGTCCCTGGTCGGCAACATCCTGACCATCTCGGCGGAGCCAGGGACCGAGTTGACGGTGACCGTCGACGTCGGCGGGGTGACCGCCA CCGCCACGGTGACCGCCGACAACAGCGGGCTGGCGTCGCTGAACCTGCTCACCGACCTGGACATCGACTTCAGTTGGGACCAGTTGCTCAATGCCCAGGT GTCGGTGGTCGGACGCGACCCGGCCGGCAACCCGAGCAACACGGCGAGCATCGGCGTCGGCACCAGCATCGAGCAACCGGTGACCATCGGCAACTTCGGC CTCGACGTCAGCCTCAACCCGCTGAACCCGCGTTTCGGTTTCAGCGGAACCACCGAGCCTGACTCCAGCGTGGTGATCCGGGTCATCACCCCGGCGTTGA ACGTCGAATTGCTGCCGATCCAGGCGGATTCGTCCGGAAACTTCTCGCTGAACCTGCTGAGCCCGACCATCCTCACCCAGTTGGGGCTGAACATCACCGA CATCCTCAACCTCGGCTCGCAGATCTCGTTCAACCTGGTGTCCACCGACTCCAATGGCAACGACAGCGCCGCCTACGGGATCACCCTGACCCCCAACGGA CTGTCGCTCAATATCGGCCAGATCGATGTCAACGGTACTTCCGGCGACGACGTGCTGTCCGGCGCCAACGGCAGTTCGGAGCACATCAACGGCGGCGACG GCAGCGACCTGATCTTCAACGTGGGCACCGGCGATCACGTGGTGGCCGGCAACGGCAACGACACCATCCAGATCACCGCGACCGATTTCGTCAGCATCGA TGGCGGCGCCGGGTTCGACACCCTGGTCCTGGCCAACGGCATCGACCTCGACTACAACGCCGTCGGCGTCGGCACGCTCAGCAACCTCGAGCGCATCGAC CTCGGCAAGGGCGACTCGGGTAGCGTGCTGACCCTGACCGCGGCGGAGGTGGATGCCATCACCGATGCCAACAACACGTTGCAGATCACCGGCGAGAACA ACGACACCCTGAACGTGGTGGGCGCGGTGAATACCGGTACCACGCAACTGATCAACGGCATTACCTACGACGTCTACACCTTCGGCAGTACCACCCTGCT GATCGAGGACAACACGGTACAGGTCGTGGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCGCGGGCGCAGGCAGTACGCGCGCAAGGGACGGCGGCATGGGAAGGGAGCCATCTGGCTCCTTTCCCTGGGTCTGCCGATGTTCGCGTCGGCCATGCC CCTCGACCAGGCGGTCAGGGCAGGGCTGGCGATCCACCCGGAAGTACGATCCGCGATGGCCGAAGCGGACCGTGCAGGCACCGAGGTGGAGATGGCCAAA GGGGGGTACTACCCCTCCGTGACGATGTCCGGGGGGCCGCAGGAGTTCGACTTCGGCGAGATCGTCTACGATCTCACCGCGTCGCAGATGCTGTACGACT GGGGTCGGGTGACGAGCAAGGTCGACAGCGCCAGCGCGACCCAGCGCAAGCTGTCCGAGGCGGTGCTGGTGGCGCGCGACGATGCGGCGCTGGATATCGT CGAGACCTACCTCGACGTGCTTGCCTCGGAGCGCCGGGTGGAGGCGGTGCGCGAACACATCCAGCGCCTCGACGGCATCCGCGAGATGACCCAGGCGCGC
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Amino Acid Sequence |
>hypothetical protein
ATVILTDGNGNPIGQVTADGSGNWSFTPGTPLANGSVINALAQDAAGNTSGPASTTVDSVAPATPVLDPSNGTVISGTAEAGATVILTDGGGNPIGQATA DGSGNWSFTPGTPLTNGTVINAVAQDAAGNTSGPVSTTVDAVAPATPVIDPSNGVELSGTAEPGVRVILTDGNGNPIGQTLADGSGNWTFTPGTPLANGT VVNAVAQDPAGNTSGPASTTVDTVAPATPVINASNGSVITGTAEVGAKVILTDGNGNPIGETTADGSGNWTFTPGTPLANGTVINAVAEDAAGNASGPAS TTVDSVAPSAPLLSISADGALLTGTAEPNSQVRIVVNGDTANPITVTVDGAGNFSLPFAPPLITGELIAGVAVDAAGNVSGPATINAPDLAPPTISVPEA ADTWINAAEIGDGIQVDVTVRPTMQVGQVVTVKFAGQNGYEAEVSHTLTAGDIAAGNLTLTLTPPGGMGPFPEGASTVTADINGGTASTPVPFTIDTIPP ATPVLSLVGNILTISAEPGTELTVTVDVGGVTATATVTADNSGLASLNLLTDLDIDFSWDQLLNAQVSVVGRDPAGNPSNTASIGVGTSIEQPVTIGNFG LDVSLNPLNPRFGFSGTTEPDSSVVIRVITPALNVELLPIQADSSGNFSLNLLSPTILTQLGLNITDILNLGSQISFNLVSTDSNGNDSAAYGITLTPNG LSLNIGQIDVNGTSGDDVLSGANGSSEHINGGDGSDLIFNVGTGDHVVAGNGNDTIQITATDFVSIDGGAGFDTLVLANGIDLDYNAVGVGTLSNLERID LGKGDSGSVLTLTAAEVDAITDANNTLQITGENNDTLNVVGAVNTGTTQLINGITYDVYTFGSTTLLIEDNTVQVVV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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